Panicum virgatum (switchgrass): 120656987
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Entry
120656987 CDS
T07260
Name
(RefSeq) fimbrin-5-like
KO
K17275
plastin-1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120656987
04147 Exosome [BR:
pvir04147
]
120656987
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120656987
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120656987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
CAMSAP_CH
CH_2
TEDC1
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
120656987
NCBI-ProteinID:
XP_039791165
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All DBs
Position
1K:complement(39073837..39078777)
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AA seq
668 aa
AA seq
DB search
MSTFVGVLVSDPGLQSQFTQVQLRTLKTKFIAAKKPDADHVTIKDLPPVMEKLRGIHEIL
SEEEINNFLNETYRDMSQPIEFEPFLKEYLNLQAKGTSKNGGKKKLKGSVSFLKSSTTTL
LHVINESEKTSYVNHINNFLGDDSFLKNFLPLDPASNELFNLVRDGVLLCKLINVAVPGT
IDERAINTKKEPNPWERNENHTLCLNSAKAIGCTVVNIGTQDLIEARPHLVLGLLSQIIK
IQLLADLNLKKTPQLAEIVAGDSGKEAEELVTLAPDKMLLKWMNFHLKKAGYKKTVTNFS
TDVKDGEAYAYLLSTLAPEHSSKTMIETSDPKERAKKVLETAEKLDCTRYVTSKDIVEGS
ANLNLAFVAQIFQNRNGLSTNTVAPVEDTPDDVEASREERAFRLWINSLGIATYVNNLFE
DVRTGWVLLEVLDKISPGSVNWKHASKPPIIMPFRKVENCNQVIKIGKELNFSLVNVAGN
DIVQGNKKLILAFLWQLMRTSILQLLKNLRSHSKEKEITDANILIWANNKVKELGKTSHI
ESFKDKSIADGIFFLELLSAVQSRVVDWSLVKKGEDDEEKKMNATYIISVARKIGCTVFL
LPEDIMEVNPKMTLTLTASIMYWSLQKHGPYQSPGPQDALPEEEGEGEEEEEEEEEEEEE
DFEGGIED
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccttcgttggtgttcttgtctccgatccggggttgcaaagccaattcacccaa
gttcagctccgaaccctcaaaacaaaatttattgctgcaaagaaaccggatgcagatcat
gtaacaataaaagatttgcccccagtgatggagaaactccgaggcatacatgagattttg
tctgaagaagagatcaacaattttttaaatgagacctatcgtgatatgagccaacctata
gaatttgagccattccttaaggaatacttaaatctgcaagcaaaggggaccagcaaaaat
ggaggcaaaaagaaattgaagggttctgtgtcatttttgaaatcttccactactaccctc
ttgcatgtcattaatgagtctgaaaaaacttcttatgtcaatcatatcaacaattttctg
ggagatgattcttttctaaaaaatttcttgccattggatcccgcatcaaatgagttattt
aaccttgttcgggatggtgtgctactttgtaagttgatcaatgttgctgttccgggcaca
atcgacgagagagcaatcaatacaaagaaggaacctaatccatgggagagaaacgaaaac
catactctttgtctcaattctgctaaggccatcggttgcaccgtcgttaatattggaaca
caagatttgattgaagctagacctcatcttgttcttggtttgttatcccaaatcataaag
atacaactactggctgatctgaatcttaagaaaacacctcagttggcagagattgtggct
ggtgatagtggcaaggaggcagaggagctagtcaccttagcgccagataagatgttgctg
aaatggatgaatttccatctaaaaaaagcagggtataaaaagactgtgacaaatttctct
accgatgtgaaggatggtgaagcatacgcttaccttctcagtacccttgcaccagagcat
agctcaaaaaccatgatagaaacttcagatcccaaggaaagggcaaagaaagtacttgaa
actgcagaaaagctcgattgtacaagatatgtgacatcgaaagatattgttgaaggttca
gcaaatcttaacttggcatttgtggctcaaatattccagaacagaaatggtctatcaacc
aatacggttgctcccgttgaagatactcctgatgatgtcgaggcatccagggaagaaaga
gcgtttcgcctatggattaatagccttggaattgcaacttatgttaacaatttgtttgaa
gatgttaggactggatgggtcctgctagaggtccttgacaaaatttctcctgggtcagtt
aactggaagcatgcatctaaaccgccaattattatgccatttagaaaggtggagaactgc
aatcaggttatcaaaattgggaaggagttaaatttttctctggtaaatgtagcaggaaat
gacattgtgcaaggaaataagaaactaattctagcttttctgtggcagctcatgaggacc
agtatcctacaattgctaaagaacctgagatcccactctaaagagaaagagatcacagat
gctaacatcctcatatgggctaacaataaggtcaaggaattaggcaaaacttcccacatt
gaaagcttcaaggacaagagcatagctgatgggatattcttccttgagctcttaagtgct
gtgcagagcagggttgttgactggagcttggtgaagaagggggaggatgatgaggagaag
aagatgaatgcaacatatatcatcagtgttgctagaaagatagggtgcactgtcttcttg
ttgccagaagacataatggaggtgaacccgaagatgaccctcaccctcactgcaagcatc
atgtactggagcctgcagaagcatggtccttaccaaagccctggaccacaagatgctctt
ccagaggaggaaggggaaggggaggaggaggaggaggaagaagaagaagaggaagaggag
gatttcgaaggaggcatcgaagattga
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