Panicum virgatum (switchgrass): 120657002
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Entry
120657002 CDS
T07260
Name
(RefSeq) galactan beta-1,4-galactosyltransferase GALS1-like
KO
K23869
galactan beta-1,4-galactosyltransferase [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120657002
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120657002
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_92
Glyco_tranf_2_4
New_glue
Motif
Other DBs
NCBI-GeneID:
120657002
NCBI-ProteinID:
XP_039791181
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Position
1N:complement(58249187..58252242)
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AA seq
518 aa
AA seq
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MKYNARKDAGGGGVGAPFAIPCVDVKSFVASLAFLTLFVAFWQLQPYGSLLTAARSSASP
PCALLATTAATGFTSPNATAGAAADTKQPPADSGTTTAAAAATSSAPVRPARPEDPIKRV
LRPYGSAAALFVQMGAYRGGPRTFAVVGLASKPTHVFSTPYFKCEWLPNPTAGDPSPRPV
RTKAYKILPDWGYGRVYTVVVVNCTFPSNPNAGNAGGKLLVHAYYSTASRRYERFVALEE
APGSYDESRFSPPFQYDYLYCGSSLYGNLSASRMREWVAYHAHFFGPRSHFVLHDAGGVS
PEVKAVLDPWVRAGRVTVQDIRAQAEYDGYYYNQFLVVNDCLHRYRHAANWTFFFDVDEY
LYLPNGQKLDEVLGKLSGYSQFTIEQNPMSSKLCVEDPSSDYSREWGFEKLVFRNSITKV
RRDRKYAIQARNAYSAGVHMSQNVRGRTTHKTESLIRYYHYHNSINAMGEPCREFVPVPV
NGSTIMFEKTPFVYDDNMKRVAGEIKRFEKETIGSVQT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacaacgcgaggaaagacgcgggcggcggcggcgtcggcgcgccgttcgccatc
ccgtgcgtcgacgtcaagtcgttcgtggcctcgctcgccttcctcacgctgttcgtcgcg
ttctggcagctccagccctacggctcattgctcaccgcggctcgctcctccgcctcgccc
ccctgcgccctcctcgccacaaccgccgccaccggcttcacctctcctaacgccacggcc
ggcgcagccgcagacacgaaacaaccgccggcggattcaggtaccaccacagccgccgct
gcggctactagttccgcccccgtgcgtccggcgcggccggaggatccgatcaagcgggtg
ctccggccgtacggcagcgcggcggcgctgttcgtgcagatgggcgcgtaccggggcggg
ccgcggacgttcgccgtcgtggggctagcgtccaagcccacccacgtgttcagcaccccc
tacttcaagtgcgagtggctgcccaaccccaccgccggcgacccctcgccgcgccccgtc
cggaccaaggcgtacaagatcctcccggactggggctacggccgcgtctacaccgtcgtc
gtcgtcaactgcacgttcccgtccaaccccaacgccgggaacgccggcggcaagctgctc
gtccacgcctactactccaccgcctcccgccggtacgagcgcttcgtcgcgctcgaggag
gcgccgggctcctacgacgagtcccgcttcagcccgccgttccagtacgactacctctac
tgcggctcgtcgctgtacggcaacctcagcgccagccggatgcgcgagtgggtggcatac
cacgctcacttcttcgggcccaggtcgcacttcgtgctccacgacgccggcggcgtcagc
ccggaggtgaaggcggtgctggatccgtgggtcagggccggccgggttaccgtgcaggac
atccgggcgcaggccgagtacgacgggtactactacaaccagttcctggtggtgaacgat
tgcctgcaccgctaccggcacgccgccaattggaccttcttcttcgacgtcgatgagtac
ctgtacctgcccaacgggcagaagctcgacgaggtgctcggcaagctctcggggtactct
cagttcaccatcgagcagaatccaatgtccagcaagctctgcgtggaggatccaagcagc
gattactcgagagaatggggatttgagaagctcgtcttccgcaactccatcaccaaagtt
cgtcgcgatcgcaagtacgccatccaagctcggaacgcgtactcagccggggtgcacatg
tcgcagaacgtccgcgggaggacaacccacaagacggagagcctgatcagatactaccac
taccacaactccatcaacgccatgggagagccctgccgtgagttcgtcccagtgccggtg
aacggcagcacgatcatgttcgagaagacccccttcgtgtacgacgataacatgaagcga
gtggcgggcgagatcaagcggttcgagaaggagaccatcggatcggttcagacatag
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