Panicum virgatum (switchgrass): 120657058
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Entry
120657058 CDS
T07260
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120657058
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120657058
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120657058
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120657058
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
120657058
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class I (A)
120657058
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120657058
Prokaryotic type
120657058
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120657058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
120657058
NCBI-ProteinID:
XP_039791237
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All DBs
Position
1N:58851137..58864225
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AA seq
236 aa
AA seq
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MEANAAYVRRSHMPPQLRRLHSRPSEPEKFPEELHPLQNNSGGAPPMLNRSRSKQTNNIN
MENSAFASVDSNRDTVDVCFDQRFATLKSIGEDRVNDLELKLLLKKKLAPICYVWCDPSP
WMHISQGIMKTLSINKMVKSGFKVKILMADWFAQMNSEIGGNLNKMRTIGRYNIEMWKAT
GMALDEVELVWLSDEISQHGDEYWPLVMDIARKNSVRRIRRQTYGCWEWISMMSTY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaacgccgcatatgtccgccgctcccacatgccaccgcagcttcgtcgcctc
cacagcaggccgtcggaaccggaaaagttccccgaagaactgcacccgcttcaaaataat
agcggaggagctccgccaatgctgaaccggagccggagcaagcagactaataatatcaac
atggagaattcagcgtttgcttccgtcgattctaatagggatacagttgacgtgtgtttt
gatcagaggtttgcaacactgaagagcattggggaggatcgtgtcaacgaccttgagctc
aagttactgctaaagaagaaactggcccccatttgttatgtttggtgtgatccctccccc
tggatgcacatttctcaggggatcatgaagacactcagtattaacaaaatggttaaatct
ggtttcaaagttaaaatcctaatggcagactggtttgcccagatgaacagtgagattggt
ggtaatctaaataagatgcggactattggcaggtacaatattgagatgtggaaagcaact
ggcatggctcttgatgaagttgagctagtctggttgtcagatgaaataagtcaacatggc
gatgaatactggccacttgtcatggatattgcaaggaagaatagtgtgcgtagaattaga
aggcagacatatggctgttgggaatggatcagcatgatgtcaacttattag
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