Panicum virgatum (switchgrass): 120657060
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Entry
120657060 CDS
T07260
Name
(RefSeq) protein-tyrosine-phosphatase IBR5-like
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120657060
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120657060
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120657060
3.1.3.48 protein-tyrosine-phosphatase
120657060
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
120657060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
PTP-SAK
Tc-R-P
Y_phosphatase
Init_tRNA_PT
PTP-NADK
Y_phosphatase3
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
120657060
NCBI-ProteinID:
XP_039791239
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All DBs
Position
1N:58886755..58890133
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AA seq
269 aa
AA seq
DB search
MRKRERENPCGICGHYHKFEEGEVCGVCGHRWKPSVGVGTPARHESAIPTEVLKDFLFLG
SYDNASRSEVLKMLGISHILNTVPDCHNQYHNSFTYHSLQRDRPLDFDGAIRFLEQCERD
KSRVLVHCMTGKNRSAAIVAAFLMNSRAWRLAQALQWVKDRRPQVQLTDASQDELLEYEQ
KLFGLSAQPVIPTESFASLGFGYTKPAGGTQAPTFNQMIAPSIFERVSPNDVPANFTFGA
RNTVEVKPQDSDNNGGTNPASTDNVMDSS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcgggagcgggagaacccgtgcgggatctgcgggcactaccacaagttcgag
gagggagaggtctgcggggtgtgcggccaccgatggaagccgtcggtaggggtgggcacc
ccggcgaggcacgagtccgccatccccaccgaggtgctcaaggacttcctcttcctcggg
agctacgacaacgcctcccgctccgaggtcctcaagatgctcggcatctcccacatcctc
aacactgtgcctgattgccacaatcaataccataattcattcacgtatcacagtcttcag
cgtgacaggcctttggattttgatggggcaatccggtttctagaacaatgtgaaagagat
aaatcacgtgttcttgttcattgcatgactggaaaaaacaggtcagcagctattgttgca
gccttcttgatgaactctagagcatggagacttgctcaggctttacagtgggtgaaagac
cgtcggccacaggttcaactgacagatgcttctcaggacgagcttctggagtacgagcag
aagctctttggactcagtgctcaacccgttattcccactgaatcatttgcttctcttgga
tttggctacacaaaaccagcaggtggcacccaagcacctacgttcaaccaaatgattgcg
ccatccatattcgagcgagtcagcccaaatgacgttcctgccaacttcacttttggagcc
cggaatacggtggaagtcaaacctcaagatagtgataacaatggtgggaccaacccagct
tcaactgataacgtgatggacagctcttaa
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