Panicum virgatum (switchgrass): 120657101
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Entry
120657101 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120657101
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120657101
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120657101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120657101
NCBI-ProteinID:
XP_039791285
LinkDB
All DBs
Position
1N:59329954..59333813
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AA seq
505 aa
AA seq
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MVCKAAMGIKAAAKLRWPPSVAAAARSRLTPWMLRATTTVLLWTCVVQLTAVGNTWGPRV
LKGWPSCRTAREAAAAAAATTTRLAMPEPVVEKAALPPKRIYRNNGYLMVSCNGGLNQMR
AAICDMVVIARYLNVTLIVPELDKTSFWNDPSEFQDIFDIEHFITSLRDEVRILRELPPR
IKRRVELGKFHSMPPISWSDISYYHKQILPLIRKYKVLHLNRTDARLANNGLPLEIQRLR
CRVNYAALKFTPQIEELGKRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCTPKEAEEL
TRMRYAYPWWKEKVINSFVKRKDGLCPLTPEEIALVLRALDIDQNMQIYIAAGEIYGGKR
RMASLTSAYPNVARKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVV
EGHRRYMGFKKTILLDRKLIVELVDQYTSGSLRWDEFSSLIKAVHANRMGSAATRTVIPD
RPKEEDYFYANPQECLRDPSLLRTS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggtctgcaaggcggcgatggggatcaaggcggcggcgaagctcaggtggccgccctcg
gtggccgccgcggcgcggtcgcgcctgacgccgtggatgctgcgcgccaccacgacggtg
ctgctctggacctgcgtcgtgcagctcaccgccgtggggaacacctgggggccccgcgtg
ctcaaggggtggccgtcctgccggacggcgcgggaggcggccgctgccgccgcggccacc
accacgcggctcgcgatgccggagcccgtcgtcgagaaggccgcgctgccgcccaagaga
atttacagaaacaatggttatttgatggtttcatgcaatggtgggcttaaccaaatgcga
gccgctatatgtgatatggttgtaattgcaagatatttgaatgtgactttgatagtcccc
gagttggataagacatcgttctggaatgacccgagcgaatttcaggatatatttgatatt
gaacattttataacctctcttagagatgaggttcgtatacttagagaattgccaccaaga
ataaagagaagagtggaattagggaaatttcactcgatgcctcctatcagttggtcagat
atctcttactaccataagcagattcttcctttgattcggaagtacaaggtcctccatctg
aatagaactgatgctaggttggcaaataatggtctgcctctggagatccagagattgcgt
tgccgggtgaattatgctgcactgaaatttacgccccaaattgaagagttaggcaagaga
gtaattagaatactccgccagaatggccccttcttagttcttcacttacgatatgagatg
gatatgcttgctttctctggctgtactcaaggttgcactcctaaagaagctgaggagctt
acaagaatgaggtacgcttacccatggtggaaagagaaagtaataaattcttttgtgaaa
agaaaagacggcctttgccctttgacgccagaggagattgctcttgtccttagagcattg
gatatcgaccaaaatatgcaaatatatatcgcagctggtgagatatatggtggaaagcgc
agaatggcttctcttacctcagcttaccctaacgtggcgaggaaggagacacttctggaa
ccttctgatctcatgttctttcagaaccattcatcacaaatggcagcgctggactacttg
gtatcactggaaagtgacatctttgttccaacatatgatggcaacatggctaaagtcgtc
gagggccaccgcaggtacatgggcttcaagaaaacgatcctgttggatcggaaacttata
gttgagctggtagatcagtacaccagtggctctttgcggtgggatgagttctcttcattg
atcaaggctgtgcatgccaaccggatgggatcagctgccaccaggacagtgatccctgac
agaccgaaagaagaggactacttctatgccaacccgcaagaatgcctgcgagatcccagt
ctgctccgaacatcgtga
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