Panicum virgatum (switchgrass): 120657140
Help
Entry
120657140 CDS
T07260
Name
(RefSeq) transcription factor MYB30-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120657140
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120657140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF4682
Myb_DNA-binding_2
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
120657140
NCBI-ProteinID:
XP_039791339
LinkDB
All DBs
Position
1K:complement(42069345..42070668)
Genome browser
AA seq
256 aa
AA seq
DB search
MGRAPCCERMGLKRGPWTPEEDRILVAHIERHGHSNWRALPKQAGLLRCGKSCRLRWINY
LRPDIKRGNFTREEEDAIIHLHHMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEPKP
ASQQQAAAPKRKPTKKKQQQQPDAEVVVLDGPTSITAPVSPEQSSLYTSTTTSSADCSAA
SSLDNNADSFTSEEDYRIEDSFWSETLAMAVDSSGDYSSGMEREDAPAAPAANDDMDFWL
KLFMQASDMQNNLLQI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgccccgtgctgcgagaggatggggctgaagagggggccgtggacgccggag
gaggacaggatcctggtggcgcacatcgagcggcacggccacagcaactggcgcgcgctg
cccaagcaggcgggcctgctgcgctgcggcaagagctgccgcctccgctggatcaactac
ctgcgcccggacatcaagcgcggcaacttcacccgcgaggaggaggacgccatcatccac
ctccaccacatgctcggcaacaggtggtcggcgatcgctgccaggctgccggggaggacg
gacaacgagatcaagaacgtctggcacacgcacctcaagaagcgcctcgagcccaagcca
gcgagccagcagcaggcggcggcgcccaagcgcaagcccaccaagaagaagcagcagcag
cagcctgatgcggaggtcgtggtgctcgacggcccgaccagcatcaccgcgcccgtgtcg
ccggagcagtcgtcgctctacacgtcgaccaccacctcctccgccgactgctcggcggcg
tcgtcgctggacaacaacgcggacagcttcacctcggaggaggactaccggatcgaggac
agcttctggtccgagacgctggcgatggcggtggacagctccggtgactattcttccggg
atggagagggaggacgcccccgccgcgccggcggccaacgacgacatggacttctggctc
aagctgttcatgcaggccagcgacatgcagaataacctgctccagatttag
DBGET
integrated database retrieval system
