Panicum virgatum (switchgrass): 120657145
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Entry
120657145 CDS
T07260
Name
(RefSeq) transcription factor MYB20-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120657145
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120657145
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120657145
NCBI-ProteinID:
XP_039791341
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Position
1N:complement(59784495..59785983)
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AA seq
273 aa
AA seq
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MGRQPCCEKVGLKKGPWTAEEDQKLVAFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLEKMG
IDPVTHRPLSPVRPKEVFPLAQKRHDTPHVRQGRCDDEPKQALSPGGPPPGAEDDDDEEA
PASAEPQGATSAASTEAAVSPSCSSSSAASASGATPGADVAAWTDTVDLFQVDSIMDMDW
AGILSGCGNDGAGIDVDLFDHYPGDGFDQQVWM
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcagccgtgctgcgagaaggtcggtctgaagaaggggccatggacagcggag
gaggaccagaagctggtcgccttcctcctctcccacggccattgctgctggaggctcgtc
cccaagctcgcagggctgctgaggtgcgggaagagctgccggctgaggtggactaactac
ctgcggccggacctcaagagaggcctcctctcggaggaggaggaagcgctggtcatcgac
ctccacgcgcagctcggcaatcgctggtccaagatcgcggcgcggctccccgggaggacg
gacaacgagatcaagaaccactggaacacccacatcaagaagaagctcgagaagatgggc
atcgaccccgtcacccaccgcccgctctctccagtgcgaccaaaggaggtttttcccctg
gcgcagaagcggcacgatacaccgcacgtgcgacaaggacgctgcgacgacgagcccaag
caggcgttgtcaccgggtgggccgccgcccggcgccgaggacgacgatgacgaggaggcg
ccggcgagcgccgagccgcagggcgcgacatccgcggcctccacggaggccgccgtgtcg
ccgtcctgctcctcctcgtccgccgcctcggcctccggcgccacccctggcgcggacgtg
gcggcctggaccgataccgtcgacctcttccaagtggatagcatcatggacatggactgg
gcaggcatcctgtccggttgcggcaacgatggcgccggcatagacgtcgacctgttcgac
cattaccccggcgatggcttcgatcaacaagtctggatgtga
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