Panicum virgatum (switchgrass): 120657185
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Entry
120657185 CDS
T07260
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120657185
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120657185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120657185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120657185
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120657185
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120657185
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120657185
RhoA-dependent endocytosis
120657185
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120657185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_11
MMR_HSR1
PH_8
Apyrase
KH_TffA
PH_20
VPS8_N
Motif
Other DBs
NCBI-GeneID:
120657185
NCBI-ProteinID:
XP_039791388
LinkDB
All DBs
Position
1N:complement(60437408..60447416)
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AA seq
922 aa
AA seq
DB search
MSSAAAMEAIDELVQLSESMRQAASLLADDDPSDETASRRPSTFLNAVALGNVGAGKSAV
LNSLIGHPVLPTGENGATRAPIVVDLARDPGLSSKSIVLQIDSKSQQVSASALRHSLQDR
LSKGASGGSGRGRSDEIYLKLRTSTAPPLKLIDLPGIDQRVMDDSTISEYAGHNDAILIV
VIPAMQAADVASSRALRLAKDIDPDGTRTIGVLSKVDQASADAKTVSCVQAILSNKGAPR
AAADIEWVALIGQSVSIASAQSGSVGSDNSLETAWRAEAETLKSILTGAPQSKLGRIALV
DTIAKQIRKRIKIRLPNLLSGLQGKSQIVQDELARLGESMVQSAEGTRAVALELCREFED
KFLAHITSGEGSGWKIVASFEGKFPDRIKQLPLDRHFDLNNVKRIVLEADGYQPYLISPE
KGLRSLIKGVLEMAKEPSRLCVEEVHRVLLDIVNAAANATPGLGRYPPFKRAVIAIASNA
LDAFKSDAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKNSRSSKKGHDTDQS
KMNRASSPQTGSDEAGGSLKSMKDKSNQQDKDTKEGPNLQVAGPGGEITAGYLLKKSAKD
NKWSRRWFVLNEKSGKLGYTKKQEERHFRGVIVLEECNLEEIEEEEISKSSKDSKKANGQ
EKGPSLVFKITNRVAYKTVLKAHSAVILKAESMADKVEWIKKIKGVIQSKGGSVKGPNTP
EDGSIRQSRSDGSLDTMARGPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVE
KSKEDMLNQLYTSISTQSNAKIEELLQEDHNAKHRREKYQKQSSLLSKLTRQLSIHDNRA
ASYGNDSSGAESPRSPGQSGEDWKSAFNSAANGSVDRSSSQHETRSRSADSRGRRYENGD
ANSGSRRTPNRLPPAPPSGGRY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggcagccatggaggccatcgacgagctcgtccagctctccgagtccatg
cggcaggccgcctcgctcctcgccgacgatgacccctccgacgagaccgcctcgcgccgc
ccctccaccttcctcaacgccgtcgcgctcggcaacgtcggcgctggcaagtcggccgtg
ctgaacagcctcatcggccaccccgtgctgcccacgggggagaacggggcgacgcgggcg
ccgatagtggtcgacctggcgagggatccggggctcagcagcaagtccatcgtcttgcag
atcgacagcaagtcgcagcaggtgtcggcaagtgcactacggcattcgctgcaggatagg
cttagcaagggggcatctggtggatcagggagaggccgaagtgatgaaatttaccttaag
ctgcggacaagtacagctcctcccctgaaattgattgatttacctggcatagaccaacgt
gttatggatgattcaacaatcagtgaatatgctggacacaatgatgcaatactgattgtt
gtgataccagcaatgcaagctgctgatgttgcatcttctcgagctcttagactagcgaag
gatattgatccagatggaactagaacaataggtgtcttaagcaaagtcgatcaagcttct
gcagatgcaaaaactgtttcttgtgttcaggccattttgtccaacaagggtgccccacga
gcagcagctgatattgagtgggttgctctaataggacagtctgtatcaattgcatctgct
caatcaggatcagttgggtctgataattcactggaaacagcttggcgagcagaggctgaa
acccttaaatccatcctaactggtgcacctcagagtaagctggggagaattgctctcgtg
gacaccattgctaagcaaatacgtaagcggataaaaattcggctgcctaacttgctgagc
ggacttcagggtaaatcccagatagtgcaagatgagcttgcaaggctaggagaatctatg
gtacaaagtgctgaaggaaccagagcagttgctctggagctgtgtcgagaattcgaagat
aaatttcttgctcatattacttctggtgaggggtctggttggaaaattgttgcaagtttt
gagggcaagtttccagataggatcaaacagcttccgctggacaggcattttgatttgaac
aatgtgaagaggattgtcttggaagcggatggttatcaaccttatttgatatctccagag
aaaggtttaagatccttaataaaaggagttttggaaatggcgaaggagccatcacgactc
tgtgttgaggaggtacaccgtgttttgttagacatagtaaatgctgctgcaaatgctaca
ccaggactaggaagataccctccattcaagcgtgcggtcattgcaattgcatctaacgcg
ttagatgctttcaaaagtgacgcaaaaaagatggtggttgcacttgttgatatggagcga
gcttttgttcctccgcaacacttcatccgattagtacagagaagaatggaaagacagcgt
cgtgaggatgagttgaaaaatagcagatcatctaagaaaggacacgacacagatcaatcc
aagatgaacagggcttcaagcccccaaacagggtcggacgaagctggtggtagcttgaaa
tcaatgaaggataaatctaatcagcaagataaggatacgaaagagggaccaaatttgcag
gttgctgggcctggtggcgaaataactgcaggttaccttttgaagaaaagtgcaaaagat
aataaatggagcagaaggtggtttgttctaaatgagaagagtgggaagcttggatacact
aagaagcaagaggagagacattttcgaggtgtcattgtcctggaggaatgtaacctggaa
gagatagaggaggaagagatttctaagagttctaaggattcaaagaaggcaaacgggcaa
gagaaaggcccaagtcttgttttcaagattactaacagggtagcctacaaaactgtctta
aaagctcacagtgccgttatattgaaggctgagagtatggctgacaaggttgaatggatc
aagaagataaaaggtgttattcaaagcaaaggaggctctgttaagggtccaaatactcct
gaggatggttctatcagacaaagccgttctgatggatcccttgatacaatggctcggggg
cctgctgatcctgaagaagaacttcggtggatgtctcaagaagttcgtggttatgttgag
gctgttttgaacagtttggcagcaaatgttccaaaggctatcgtactttgccaagtggag
aaatcaaaagaagatatgctaaaccagttgtacacctcaataagtacacaaagcaatgca
aaaatcgaagaactactccaagaggaccacaatgctaaacataggcgtgaaaagtaccaa
aaacaatcatctctcttgtcaaagctcactcggcagctcagcatccatgataacagagca
gcttcgtatgggaatgatagttctggagctgagagcccacggtctcctggccaatctggt
gaggactggaaatctgccttcaattctgcagcaaatggctctgttgatagatccagttct
cagcatgagacaaggtcaagaagtgctgatagtcgtgggcggcgctatgaaaatggtgat
gccaactcgggcagccggcgcacacctaaccggttgccaccggccccaccaagtgggggg
agatactaa
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