Panicum virgatum (switchgrass): 120657237
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Entry
120657237 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120657237
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120657237
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120657237
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120657237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Perilipin
NDUF_C2
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120657237
NCBI-ProteinID:
XP_039791451
LinkDB
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Position
1N:61178025..61179905
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AA seq
490 aa
AA seq
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MAGGRASARRRAVVAAVTTLILLASVSFLLSATATSSAAANSPASRLAVVQRHAEDHAAV
LAAYTAHARHLSALSASQTDAFLSISSRLSALASRLSVSTVGALEKEVKAQVKRARSLAG
AAKEAFDTQSKIQKLSDTVFAVGQQLLRARRAGVLNARIAAWSTPKSLHCLAMRLLEARL
ANASAVPDDPPVPPPQFADPSLYHYAVFSDNVLAVSVVVASATRAAAEPSRHVFHVVTAP
MYLPAFRVWFARRPPPLGAHVQLLSVSDFPFLNASYSPVLRQIEDGNRDVALLDYLRFYL
PEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGAAVNAALHTCFGGFRRYGKYLNFSDPVV
RESFSPGACAWSYGVNVFDLQAWRREQCTEQFHRFMEMNENGTLWDPASVLPAGLMTFYG
KTKPLDKSWHVMGLGYNPHIRPEDINGAAVIHFNGNMKPWLDVAFNQYKHLWTKYVDTEM
EFLTLCNFGL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcagagcatccgcgcggcgccgcgcggtggtcgcggccgtcaccacgctg
atcctcctcgcctccgtctcgttcctcctgtctgccacggccaccagctcggccgccgca
aactccccggcctcgcgcctggccgtcgtccagcggcacgccgaggaccacgcggccgtc
ctggcggcctacacggcccacgcgcgccacctcagcgcgctctcggcctcccagacggac
gccttcctctccatctcgtcgcgcctctccgccctggcctcccgcctctccgtctccacc
gtgggggccctggagaaggaggtcaaggcccaggtcaagcgcgcgcgctccctcgccggc
gccgccaaggaggcgttcgacacgcagtccaagatccagaagctctccgacaccgtcttc
gccgtggggcagcagctcctccgcgcccgccgcgcgggcgtgctcaacgcccgcatcgcc
gcgtggtccacgcccaagtcgctccactgcctcgccatgcgcctcctcgaggcccgcctc
gccaacgcctccgccgtccccgacgacccgcccgtcccgccgccacagttcgccgacccg
tcgctctaccactacgccgtcttctccgacaacgtgctcgccgtctccgtcgtggtggcc
tccgcgacccgcgcggccgccgagccctcgcgccacgtcttccacgtggtcaccgcgccc
atgtacctcccggcgttccgcgtctggttcgcgcgccgcccgccgccgctcggcgcgcac
gtgcagctcctgtccgtctccgacttcccgttcctgaacgcgtcctactcgccggtcctc
aggcagatcgaggacgggaacagggacgtggcgctgctggactacctccggttctacctc
ccggagatgttcccggcgctgcggagggtggtgctcctggaggacgacgtggtggtgcag
agggacctggcggggctgtggcgcgtcgacatgggcgccgccgtgaacgccgcgctgcac
acctgcttcggagggttccggcgctacggcaagtacctcaacttctcggaccccgtcgtc
cgggagagcttcagccccggcgcgtgcgcctggtcctacggcgtcaacgtcttcgacctc
caggcgtggcgccgggagcagtgcaccgagcagttccaccgcttcatggaaatgaatgag
aacgggacgctctgggatccggcgtccgttctgccggccgggctcatgacgttctacggc
aagacgaagccgctggacaagtcatggcacgtgatggggctcgggtacaacccgcacatc
agacccgaggacatcaacggagctgccgtgatacacttcaacgggaacatgaagccatgg
ctggacgtcgccttcaaccagtacaagcacctctggaccaagtacgtcgacaccgagatg
gagttcctgacgctctgcaactttggactctga
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