Panicum virgatum (switchgrass): 120657250
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Entry
120657250 CDS
T07260
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120657250
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
120657250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
120657250
NCBI-ProteinID:
XP_039791471
LinkDB
All DBs
Position
1N:complement(61333605..61337789)
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AA seq
787 aa
AA seq
DB search
MEAAAPPPPLPLLPDFNPGVRCFLDARFRSAADLATAADVEAEIRGLCAELEALVSDLSV
RIYEAAAAYSSCREAAGLALRGVRDGLGALRASISTGVGEEVEVGTEKMQFEQLGALASE
VARVEMVREYAETALKLDSLVGDEEDAVSSSVTRKLKSVGDNSEKTHHAVIGYLKNIEDI
LASVTTTRPQWACLLSAVDHRVDRSLAILRPQAIVDHRALLSSLGWPPSLAGSKFSSIDS
GKQAEIVNPLFSMTGDLKSKYSESFLSLCNLQELQTRRKARQLKGHNVGNQLRQPLWVIE
ELVNPLSTAAQHHFSKWTDKPEFVFALSYKIIRDFVDSMDEILQPLVDKAKLIGYSCREE
WISGMVMALSTYLAKERFPKQIELIQESSSGDAGCTPYQARVSWLSLVDLMISFDKRTQD
LISGTGLLLTVKDDDNWQRISVLSVFCDRPDWLEVWAEIERQETLYKLKSAMESEKNWST
RNQGTMLEYGSDDYKSPVITTAIQQSLSLLIDRARPIPSIALRAEFVRMSASPIISEFLG
YMLQRCQEAEGLTALADDNALLKVFESINAARYFESTLTEWCEDVFYLEMENLSVNGEGG
CIFHQEINHLKEFRVEWVDKITTVILRAFDSRSRDYLKNKRQWLEKSEGPAVSRAFIESL
DYMQGQLSKLEGGLNALDFVTVWRSVASGVDQLLFAGIFTGSTKISNGGVERFEGDLSVL
FAVFSAWCLRPEGFFPRLSEGLGLLKVDEQQVRDGVFTDKNWLRQHGIRHLTAADTEKVI
KNRVYEA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggcagctccacctcctccgctcccgctcctcccagacttcaacccaggggtc
cggtgcttcctcgacgcccgattccgctcggcggcggacctcgccacggccgccgacgtc
gaggccgagatccgcgggctgtgcgcggagcttgaagccttagtatccgacctgtccgta
cgcatatacgaagctgctgcagcgtactcgtcttgccgcgaggccgctggtttggccctt
cgtggcgtccgcgacgggcttggtgccctcagagcctccatctccacaggggttggagaa
gaggtggaggttggaacggagaagatgcagtttgagcaactcggtgctctagcttccgag
gtggcaagggtggagatggtcagagagtacgccgaaacggctctaaagcttgacagtttg
gtgggcgatgaagaagatgctgtatcttcttctgtcactagaaaactgaaatctgttggg
gacaattcagagaaaacacatcatgctgtgattggatatcttaaaaacatagaagatatt
ttagcttcggtaaccacgactagaccacaatgggcttgccttctatctgccgtggatcac
agagtggaccgatctttagctatactaagaccacaagccattgttgatcatcgagctctt
ctgtcatcccttggttggcctccttcattggctggctccaaattttcaagtattgattca
ggaaaacaagcagagattgtgaacccattgttttcaatgacgggtgacctgaagagcaag
tattctgagagctttctttcactatgcaacttgcaggaactgcagacacgcagaaaagcc
cgacaactgaaagggcataatgtgggcaatcaattacgtcaaccattatgggtaattgaa
gagctagtaaatccactatctacagcagcacaacaccatttctcaaaatggactgacaag
cctgaatttgtttttgctctttcttataagataattagagattttgttgattcgatggat
gagattctacagccccttgtggataaggccaaacttattgggtatagttgtagagaggag
tggatttcaggaatggtcatggcattgtctacatacttggcgaaagagagatttcctaag
cagattgaacttattcaagaaagtagctcaggcgatgcaggctgcacgccatatcaggct
agagtctcatggctgagtcttgttgatctgatgatatcttttgacaagcgaactcaagat
ttaatctcaggtacaggactcctacttacggttaaggatgatgacaattggcagaggatc
tcagtcctctctgtcttctgtgatcggccagattggcttgaagtgtgggcagagattgag
agacaagagactctttataaactgaaatcagcaatggagtcagagaaaaattggagtaca
aggaatcaaggaacaatgcttgagtatggatcagatgattacaagtctccagtaattacc
actgccattcagcagagcttgtctttgctaattgatcgtgctcgtcctatcccaagcatt
gcacttagggctgaattcgttaggatgtctgcttctcctattatatcagaattccttggt
tacatgctccagaggtgtcaagaagccgagggactaactgctctggcagatgataatgct
ctgctcaaggtatttgaatccatcaatgctgctcgatacttcgaatccacgttgacagaa
tggtgtgaggatgttttctatcttgaaatggaaaatttatctgttaatggtgagggtggg
tgtatctttcatcaagagataaatcatctgaaagagttcagagtggaatgggtcgataag
attactactgtcattttacgtgcatttgattctcgttctcgggattatctgaaaaataag
aggcagtggctggagaaatcagaggggcctgctgtatccagagccttcatagaatcttta
gactacatgcaagggcagctatctaaactggaaggtggcctaaatgcccttgattttgtg
accgtatggagaagtgtcgcaagtggagtagaccagctgcttttcgccggcattttcaca
ggcagcacaaagattagcaatggtggagtagaaaggtttgagggcgacctgagcgttttg
tttgctgtattttcagcgtggtgtctaaggcccgaaggcttctttccaagactgtccgag
ggactcgggttactgaaggttgacgagcagcaggtaagagatggcgtgtttacagataag
aattggctgaggcaacatggtattaggcatctgactgctgctgacactgagaaggtaata
aaaaaccgggtgtatgaggcatga
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integrated database retrieval system
