Panicum virgatum (switchgrass): 120657277
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Entry
120657277 CDS
T07260
Name
(RefSeq) probable beta-D-xylosidase 7
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
PSD3
Motif
Other DBs
NCBI-GeneID:
120657277
NCBI-ProteinID:
XP_039791504
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Position
1N:complement(61563910..61568071)
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AA seq
788 aa
AA seq
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MGRRARSCPHVAAPAAVLLLLLLHLVLAPHAAAASDPPYTCGAGAPPNIPFCDTGLPIDR
RVGDLIARMTVAEKISQLGDESPAVPRLGVPAYKWWSEALHGVSDHGRGVHLSGPLRAAT
SFPQVILTAASFNPHLWYRIGQVIGVEARAVYNNGQAEGLTFWAPNINVFRDPRWGRGQE
TPGEDPTVTGKYAAVFVRGVQGYGISGPVNSTDLEASACCKHFTAYDLENWKSVTRYVFD
AKVTAQDLEDTYNPPFKSCVEDGHASGIMCSYNRVNGVPTCADYNLLSKTARQNWGFYGY
ITSDCDAVSIIHDAQGYAKTAEDAVADVLKAGMDVNCGSYVQQHGASALQQGKITEQDID
RALHNLFAVRMRLGLFNGDPRRNRFGNIGPDQVCSQEHQDLALQAAQEGIVLLKNDGAAL
PLSKSTVASLGVIGFNANDATRLLGNYFGPPCVTATPLQVLQGYVKDTRFAAGCNAAACN
VTAIPEAVQVASSVDSVVLFMGLDQDQEREEVDRLDLTLPGQQQSLIESVANAAKKPVIL
VLLCGGPVDVSFAKTNPKIGAILWAGYPGEAGGMAIAQVLFGEHNPGGRLPVTWYPQDFT
EVPMTDMRMRADPATGYPGRTYRFYRGQTVFDFGYGLSYSKYSHRFVASGTKPPSMSSIA
GLKALEPTTTAAGAATYDVEAIGSEACERLKFPAVVRVQNHGPMDGKHPVLLFLRWPNAT
DGSGRPARQLIGFRSLHLRAMQAAHVEFEVSPCKHFSRASEDGRKVIDQGSHFVMVGEDD
EFEMSFMA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccgcgcgcgctcctgcccccacgtcgccgcgccggcggcggtcctcctcctc
ctcctcctgcacctggtgctggcgccgcacgccgccgcggcgtccgacccgccctacacc
tgcggcgccggcgcgccgcccaacatcccgttctgcgacacgggcctgccgatcgaccgg
cgcgtgggcgacctcatcgcgcggatgacggtggcggagaagatctcgcagctcggggac
gagtccccggccgtccccaggctcggcgtgccggcgtacaagtggtggtccgaggcgctg
cacggcgtgtcggaccacggccgcggcgtccacctcagcggcccgctccgcgccgccacc
agcttcccgcaggtcatcctcaccgccgcgtccttcaacccgcacctctggtaccgcatc
ggccaggtgatcggcgtggaggcgagggcggtgtacaacaacgggcaggcggaggggctc
accttctgggcgcccaacatcaacgtgttccgggacccgcggtggggcaggggccaggag
acccccggcgaggacccgacggtgaccggcaagtacgccgccgtcttcgtccgcggcgtg
cagggctacggcatctccggccccgtcaactccaccgacctcgaggcctccgcctgctgc
aagcacttcaccgcctacgacctcgagaactggaagagcgtcacccgatacgtcttcgac
gccaaggtgacggcccaggatctggaggacacgtacaaccctccgttcaagagctgcgtg
gaggacggccacgccagcggcatcatgtgctcctacaaccgcgtcaatggcgtgccgacg
tgcgccgactacaacctcctctccaagaccgccaggcagaactggggattctacggatat
atcacttcggactgcgacgctgtgtcaatcatccatgacgcgcaagggtatgccaagacg
gcagaagatgcagttgcagatgtcctcaaggctgggatggacgtgaactgtggcagctac
gtgcagcagcacggcgcgtctgcgctgcagcaggggaagatcaccgagcaggacatcgac
agagccctgcacaacctgttcgccgtcaggatgcggctggggctcttcaacggcgacccc
aggcgcaaccggttcggcaacatcggcccggaccaggtctgctcgcaggagcaccaggac
ctggccctgcaagcggcgcaggagggcatcgtcctcctcaagaacgacggcgccgcgctg
cccctgtccaagtccacggtcgcctcgctcggcgtcatcgggttcaacgcgaacgacgcc
acgcggctgctcggcaactacttcggcccgccctgcgtgacggcgacgccgctccaggtg
ctgcagggctacgtcaaggacacgaggttcgccgccggctgcaacgccgccgcctgcaac
gtgacggcgatccccgaggccgtccaggtggcgagctcggtggactccgtcgtgctgttc
atgggcctggaccaggatcaggagagggaggaggtcgaccggctggacctgacgctcccg
gggcagcagcagagcctcatcgagagcgtggcgaacgccgcgaaaaagccggtgatcctg
gtgctgctgtgcggcgggccggtggacgtgagcttcgcgaagacgaaccccaagattggc
gccatcctgtgggctggctaccccggcgaggccggcggcatggccattgcgcaggtcctc
ttcggagagcacaacccaggtgggaggctaccggtgacgtggtatcctcaggatttcacg
gaggtgcccatgacggacatgcggatgcgcgccgacccggcgacgggctaccccggccgg
acgtaccggttctaccgcggccagaccgtgttcgacttcggctacggcctgagctactcc
aagtactcccaccgcttcgtcgccagtggcacgaagcccccctccatgagcagcatcgcc
ggcctgaaggcgctggagccgacgacgactgcggccggcgcggcgacgtacgacgtggag
gcgatcgggtcggaggcgtgcgagcggctcaagttcccggcggtggtgcgggtgcagaac
cacgggcccatggacgggaagcacccggtgctgctgttccttcggtggcccaacgcgacg
gacggcagcggtaggccggcccggcagctgatcgggttccggagcctgcacctgcgggcg
atgcaggcggcccacgtggagttcgaggtgagcccgtgcaagcacttcagccgggccagc
gaggacggccggaaggtgattgaccaggggtcgcacttcgtgatggtcggcgaggatgac
gagttcgagatgagcttcatggcgtga
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