Panicum virgatum (switchgrass): 120657282
Help
Entry
120657282 CDS
T07260
Name
(RefSeq) probable trehalose-phosphate phosphatase 4
KO
K01087
trehalose 6-phosphate phosphatase [EC:
3.1.3.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120657282
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.12 trehalose-phosphatase
120657282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trehalose_PPase
Motif
Other DBs
NCBI-GeneID:
120657282
NCBI-ProteinID:
XP_039791507
LinkDB
All DBs
Position
1N:61656283..61659257
Genome browser
AA seq
359 aa
AA seq
DB search
MTNQDVVVSEMGIAAGAALPGPSPALLACRGAAAGAMSLRYLDLAAAAARSASCTWADAM
RASSPTRSRAAGDVDEFTAWMRKHPSALGKFDQIASASKGKKIVMFLDYDGTLSPIVADP
DEAYMSDAMRAAVRDVAKHFPTAIVSGRCRDKVRNFVGLSELYYAGSHGMDIKGPSSNPE
SVLCQPASEFLPVIDEVYKALVEKTKSTPGAKVENNKFCLSVHFRCVDEKRWNALAEQVK
AVIKDYPKLKLTQGRKVLEIRPSIMWDKGKALEFLLESLGFASCSDVLPVYIGDDRTDED
AFKVLRKRGQGIGILVSKCPKETNASYSLQDPSEVMDFLLRLVEWKRKSPPPPMIRPRV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccaggacgtggtcgtgtcggagatgggcattgcggccggggcggcgctgccg
ggcccgagcccggcgctcttggcttgccggggcgcggccgccggcgccatgtcccttcgg
tacctcgacctggccgcggccgccgcgcgctcggccagctgcacctgggccgacgccatg
cgcgcctcgtcccccacccgctcccgcgccgccggcgatgtcgacgagttcacggcctgg
atgaggaagcacccgtcggcgctcggcaagttcgaccagattgccagcgcgtccaagggg
aagaagatcgtcatgttcctggactacgacggcacgctctcccccatcgtcgccgacccc
gacgaggcctacatgagcgacgcgatgagggcggcggtgcgcgacgtcgcgaagcacttc
ccgacggcgatcgtgagcgggcgctgccgcgacaaggtgcgcaacttcgtcggcctctcg
gagctctactacgccggcagccatggcatggacatcaagggaccaagctccaatccggag
tcggtcctgtgccaacctgcaagcgagttcctccccgtgatcgacgaggtgtacaaggcg
ctggtggaaaagacgaagtccacacctggagccaaggtggagaacaacaagttctgcctg
tccgtgcacttcagatgtgtagatgaaaagagatggaatgctttggcggagcaagtcaag
gccgtcatcaaggactaccccaagctgaagctcactcaagggaggaaggttctggagatc
cgcccgagcatcatgtgggacaagggcaaggccttggagtttctgctcgaatcgctcgga
ttcgccagctgcagcgacgtcctcccggtgtatatcggtgacgaccgcaccgacgaggat
gctttcaaggtgctgaggaagaggggtcagggcatcggcatcctcgtctccaagtgcccc
aaggagaccaacgcctcctactccctgcaggacccgagcgaggtcatggacttcttgctc
cggctggtggagtggaagcgcaagtcgccgccgccgccgatgatccggccgcgagtgtag
DBGET
integrated database retrieval system
