Panicum virgatum (switchgrass): 120657292
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Entry
120657292 CDS
T07260
Name
(RefSeq) transcription factor MYB93-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120657292
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120657292
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Myb_DNA-bind_7
PLU-1
Motif
Other DBs
NCBI-GeneID:
120657292
NCBI-ProteinID:
XP_039791517
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All DBs
Position
1N:complement(61763308..61764826)
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AA seq
325 aa
AA seq
DB search
MGRSPCCDENGLKKGPWTSEEDQKLMEYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNY
LRPDIKRGKFTEEEEQTILRFHSVLGNKWSAIAKHLPGRTDNEIKNFWNTHLKKKLIQMG
FDPMTHRPRTDFFAALPQLIALANLRQLVEQRPWDDHAARLQVEAVQAAKFQCLQNLIQS
AASIAISPSSSSINTIPDLEQIGLLSPPQMSSLSSLPSPSFLESISGQDIVAGQLPDIQI
PSTFFEQPTSNDTNQNSDFTPKSSVEGENGTPKTLLLSENSLPPLTDFPISNLGDACSAS
SCDGSSIQFPSWPEFFDEQFLSEFE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggtctccttgctgtgatgagaatggcctcaagaaggggccatggacctctgaa
gaagaccagaagctcatggagtacatccagaagcacggccatggaagctggagagcactg
ccgaagcttgcagggctcaacaggtgtggcaagagctgcaggctgagatggaccaactac
ctgaggccagacatcaagagagggaagttcaccgaagaggaagaacaaaccatcctccgg
ttccactccgtccttggcaacaagtggtcagccatcgcgaagcacctcccggggcggacg
gacaacgagatcaagaatttctggaacactcacctgaagaagaagctgatccagatgggc
ttcgacccgatgacgcacaggccaagaacagacttctttgctgcgctgcctcaactcatt
gcgctggccaacctccgccagcttgtggagcagcggccatgggacgaccacgccgccagg
ctgcaggttgaggcggtccaggctgcaaagttccagtgcctccagaacctgatccagtct
gcagcatctattgcaattagtcccagttccagcagcatcaacaccatccccgacctggag
caaattggcctcctgagtcctccgcagatgtcttccctgtcttcgttgccttctccaagt
ttcctcgagagtatcagtggccaggacatcgtagctggacaactgcctgacatccaaatt
cctagcactttctttgagcagcccaccagcaatgatacaaaccagaactcggacttcact
ccaaagagtagtgttgagggagagaatggaacccctaaaacgctgctgctgtcagaaaac
tcccttccgccactcaccgacttccccatttccaacctcggcgatgcttgcagcgcctca
agctgtgacggtagcagcattcaattcccaagttggcctgagttctttgatgaacagttc
ttgagcgagttcgaatga
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