Panicum virgatum (switchgrass): 120657347
Help
Entry
120657347 CDS
T07260
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120657347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120657347
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
120657347
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120657347
Prokaryotic type
120657347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
120657347
NCBI-ProteinID:
XP_039791581
LinkDB
All DBs
Position
1N:complement(63230549..63233912)
Genome browser
AA seq
297 aa
AA seq
DB search
MRSLRLRAISSVNSTHPLLRRTLGLEPQLSPSTNAAGEASPMTTSGAPTPPRFKRSSPRK
KSQLRSRRLAAGEAEAAGAPALARAPLPSPLEVDAVPRIGRALPREFFEVDALDLAPRLL
GKLLRRDEVILRITEVEAYRPNDSACHGRFGITARTAPVFGPGGHAYVYLCYGLHMMLNV
VADMEGVGAAVLIRSCSPVTGLETIQRRRGQQTEKPILLTGPGKVGQALGLSTDWSNHPL
YTPGGLEVLDGPEPEAILVGPRVGIDYASPEHVAAPWRFAIAGTPWISAPKNTLRPR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccctccgtctccgtgccatctcgtccgtcaattccacgcacccccttctccgc
cgaactctgggactcgaacctcaactctcgccgtcgacgaacgccgccggcgaggcatcg
ccgatgaccacctccggcgcgcccacgcccccacgcttcaagcgctcctcccccaggaag
aagtctcagctaaggagccgccgcctcgccgccggagaggccgaggctgctggggccccg
gcgttggcgagagcgccgcttccctcaccgctggaggtggacgcggtgccgcgtattggg
cgcgcattgccgcgagagttcttcgaggtggatgccctcgacctcgccccccgcctcctc
ggcaagcttctgcgccgcgacgaagtcatccttcgcatcaccgaggtggaggcctacagg
ccaaatgattccgcatgccatggccggttcggcatcacggcgaggactgctccagtgttt
ggaccgggaggccatgcatatgtgtatctatgctatgggctccacatgatgcttaatgtt
gttgctgacatggagggtgttggtgctgctgttttgatccggtcatgttctccagttacg
ggtcttgaaactattcagcggcgccgaggtcaacagaccgagaaaccaattctacttaca
gggccaggaaaggttggacaagctctggggctatccactgattggtcgaaccatcctctt
tacacacccggtgggttggaggtactggacgggccagagccggaggccattctggttggt
ccccgcgtgggcatcgattacgcatctcccgagcatgtcgcagcgccgtggaggttcgcc
attgccggcactccgtggatcagcgctcccaaaaatacccttcggccacgctga
DBGET
integrated database retrieval system
