Panicum virgatum (switchgrass): 120657354
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Entry
120657354 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit A-4-like
KO
K08064
nuclear transcription factor Y, alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120657354
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120657354
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
120657354
NCBI-ProteinID:
XP_039791589
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Position
1N:complement(63332444..63336723)
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AA seq
267 aa
AA seq
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MLLPSSSSSSASKGNSLRKTAIDNMRSTLSFDNKQPVFASQGIDYGQPIACISYPYNDSG
SGGVWAAYGSRASAATVFHPQIAGGGTSARIPLPLELAENEPIYVNPKQYHGILRRRQFR
AKLEAQNKLVKARKPYLHESRHLHAMKRARGSGGRFLNTKQLQQQPRNASTRSTTNGTSS
SGSTHLRLGGGTARDQTMLAPKAMPPQDNSKKAVSSAPGLTVTQMLRRDDTFFQHPSHHL
SFSGHFGQASAQAGMHNGTQHRVPVMR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcccctcttcgtcttcctcttccgcttccaaaggtaactctttgaggaaaaca
gctattgataacatgagatcaactttaagttttgataataagcaacctgtatttgcaagt
caaggcattgactacggccagccaatagcttgcatttcatacccatacaatgattctggc
tcaggaggtgtttgggcagcctatgggtcacgcgccagtgctgccactgtgtttcatccc
caaattgctggtggggggacatctgcaagaattcccttgcctttggaattagcagagaat
gagcccatatatgtgaatcccaaacaatatcacggtatacttcgcagaagacagttccgt
gctaagttagaggctcagaacaagctagtcaaagcgcgaaagccttaccttcatgagtct
cggcatcttcatgcaatgaagagggcaagaggttcgggtggacgattcctcaatactaaa
cagctccagcagcagcctcgcaatgcctccaccaggtccaccacaaatggcacaagctcc
tcaggttcaactcatcttcggcttggtggtggcacagctagagatcaaactatgttggca
cccaaagcaatgcccccacaagacaatagcaagaaagctgtttcttcagctcctggcttg
accgtgactcaaatgttgcgcagagatgacaccttcttccagcacccaagtcatcatctc
agcttctctggccattttgggcaggcaagtgcgcaagccggcatgcataacgggactcaa
catagggttccagttatgagatga
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