Panicum virgatum (switchgrass): 120657371
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Entry
120657371 CDS
T07260
Name
(RefSeq) endoglucanase 8-like isoform X1
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120657371
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120657371
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GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120657371
NCBI-ProteinID:
XP_039791609
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Position
1N:63565460..63577264
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AA seq
496 aa
AA seq
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MRALKHGTMRAHVALALAALVLAGDALQPALAAGGFNYHDALTKSIIFLEAQRSGKLPPN
NRVKWRGDSGLEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTALAFKPELESAK
EMDHVNEALRWGTDYLLKCAARKKKLWVQVGDPNLDHQCWVRPENMKAPRTLYEIDEKTP
GTEIAAETAAAFAAASMVFRNDKKYSRALLNKAKLLFLLAKSHQGSYDGECPFYCSYSGY
NDELLWAATWLYLATKRQLYADYISHEAISSSVAEFSWDLKFPGAQVLLAEFNLTSGGGA
QTFKTQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANTQYVTSTAFLFIVYSDLLLRTG
QSVLCGSQPIRPERLREFARQQMDYLLGANPRGSSYVVGFGANPPTQPHHRGASTPVLPP
GYDVNCGLSFGEWFAPDRPNPNELTGAIMGGPDKDDKFVDKRANSSYTEPCTYINSLAIG
PLAALAVRGAQLVATH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcactcaagcacggcaccatgcgcgcccacgtcgccctggccctcgcggcgctg
gtgctcgccggcgacgccctgcagccggcgctggccgccggcgggttcaactaccacgac
gccctcaccaagtccatcatattcctcgaggcgcagcgctccgggaagctgccgcccaac
aaccgcgtcaagtggcgcggcgactccggcctcgaagacggcaagctcgccaatgtggat
ctcaccggtggatactacgacgccggcgacaacgtcaagtacgggctcccgctcgccttc
acggtgacgacgctcgcgtggacggcgctggcgttcaagcccgagctggagtcggccaag
gagatggaccacgtgaacgaggccctcaggtggggcaccgactacttgctcaagtgcgcc
gcgaggaagaagaagctgtgggtgcaggtcggtgaccccaacctggaccaccagtgctgg
gtgcgtccggagaacatgaaggcgccgcggacgctgtacgagatcgacgagaagacgccc
gggacggagatcgccgccgagaccgccgccgccttcgccgccgcctccatggtgttccgc
aacgacaagaagtattctcgcgcactcctcaacaaggccaagctgctgttcctgctcgcc
aagagccaccagggcagctacgacggcgagtgccccttctactgctcctactccggctac
aacgacgagctgctgtgggccgccacgtggctgtacctggcgacgaagcggcagctgtac
gccgactacatctcccacgaggccatctcgtcgagcgtggccgagttcagctgggacctc
aagttccccggcgcgcaggtcctgctggcggagttcaacttgacctccggcggcggcgcg
cagaccttcaagacccaggccgacaacttcgtgtgcgcggtgctcccggacacggcgttc
caccaggtgttcatcacccccggcggcgtgatccacctccgcgacggcgccaacacgcag
tacgtgaccagcacggccttcctcttcatcgtctacagcgacctgctgctgcgcacgggg
cagagcgtgctgtgcgggagccagcccatccggccggagcgcctccgcgagttcgcccgg
cagcagatggactacctgctgggcgccaacccgcgcgggagctcctacgtcgtgggcttc
ggcgccaacccgccgacgcagccgcaccaccggggggcctccaccccggtgctcccgccc
gggtacgacgtcaactgcgggctcagcttcggggagtggttcgcgcccgaccggcccaac
cccaacgagctcaccggcgccatcatgggcgggcccgacaaggacgacaagttcgtggac
aagcgcgccaactcctcctacaccgagccctgcacctacatcaactccctcgccatcggc
ccgctcgccgcgctcgccgtgcgcggcgcgcagctcgtcgccacgcactga
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