Panicum virgatum (switchgrass): 120657405
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Entry
120657405 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit 7A
KO
K03061
26S proteasome regulatory subunit T1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120657405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120657405
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120657405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PRS7_OB
AAA_lid_3
AAA_2
AAA_22
AAA_5
AAA_16
RuvB_N
nSTAND3
DUF815
AAA_7
RNA_helicase
AAA_28
AAA_33
AAA_18
TIP49
AAA_14
NPHP3_N
Mg_chelatase
Parvo_NS1
AAA_24
Prot_ATP_ID_OB_C
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
120657405
NCBI-ProteinID:
XP_039791648
LinkDB
All DBs
Position
1N:complement(63941618..63946160)
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AA seq
426 aa
AA seq
DB search
MAPEPEDDIMNEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKE
SDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGD
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD
IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP
KYMVYN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctccagagcctgaggatgatatcatgaacgagaagaatccccgcccgctcgacgag
gacgacatcgcgcttctcaagacctacgggcttgggccgtactcgaccagcattaagaag
gtcgagaaggagatcaaggaaatggcaaagaaaatcaatgacctctgtgggataaaggag
tctgatacagggctcgctccacctagccagtgggatttggtgtcagataaacagatgatg
caggaagaacagccattacaagtagcaaggtgtacaaagattataagccctaatactgat
gatgccaaatatgttataaatgtaaaacaaattgcaaagtttgtggttggattgggggat
aaggtttccccaactgatatcgaggaagggatgagggtcggtgttgatcgtaacaagtac
cagattcaaattcctctgccaccgaaaattgacccaagtgttaccatgatgactgtggag
gagaaaccggatgtgacatacaatgatgttggtggatgcaaggagcaaattgaaaagatg
cgtgaagttgttgaacttcctatgcttcacccagaaaagtttgtcaagcttggtattgac
cctccaaagggtgtcctttgctatggtccacctggtactggcaagacacttcttgcaaga
gctgtagcgaatcgaactgatgcttgtttcatccgagtaattggaagcgagttagttcag
aagtatgttggagaaggtgctcggatggttagggaactgtttcagatggcccgctcgaag
aaagcatgcattgtcttctttgatgaagttgatgctattggtggtgctcgttttgatgat
ggggttggtggcgacaatgaggtgcagcgcacaatgttggaaatagtaaatcaacttgat
gggtttgatgcaagaggaaacatcaaggttctcatggcaactaacaggcctgataccttg
gatcctgcacttcttcgtcctggtcgtctggacagaaaggtagaattcggactacctgac
cttgagggccgtacccaaattttcaagatacatacacgcaccatgaactgcgagcgagac
attcgcttcgagcttcttgcacggctctgccctaactccactggagcggatataagaagt
gtatgcacagaggctgggatgtatgccattcgtgcccgtaggaaaacagtgactgaaaaa
gatttccttgatgctgtgaacaaggtgatcaagggttaccagaagtttagtgccacaccg
aagtacatggtgtataactaa
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