Panicum virgatum (switchgrass): 120657408
Help
Entry
120657408 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 4-like isoform X1
KO
K03351
anaphase-promoting complex subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120657408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120657408
03036 Chromosome and associated proteins [BR:
pvir03036
]
120657408
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120657408
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120657408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
WDR55
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
B-prop_COPA_B_2nd
Beta-prop_IFT122_1st
Beta-prop_ELP1_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
KNTC1_N
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Ge1_WD40
WD40_APC4_C-half
Motif
Other DBs
NCBI-GeneID:
120657408
NCBI-ProteinID:
XP_039791652
LinkDB
All DBs
Position
1N:63960753..63977360
Genome browser
AA seq
634 aa
AA seq
DB search
MAEEQMEEASTAAAAATPFQLQFDKPIPFQIKMAEWNPEKDLLAMVTDDSKVLLHRFNWQ
RLWTISPGKCITSICWSPDGKIIALGTEDGLVLLHDVENGKMLRTIKSHDVAIVCLNWAE
DDLLSTPDKDDFLPYEDRTARFFPPAPVMPRIGGLSSGDTGLADENEEAIPQFCSASCQR
FNILCSGGKDGCVCFSIFGIFPVGKININKIPIIVESSGKKNYQLQDASVSKVSLSRNLQ
KLVLLCYGKLIDTENLSHNCNTAGLHCLYLDTSIFFNRKNELHQVSQQASSIQDLVEVVR
ASISLISKQWSSAMNLFHEKFRALPNLIAAHGVESSSEDEFLSLLFGTRTSPALHQFLAS
SLGEAGLKRIAKAVDSAGREIRGIVSEHLQPAVEIISFRLAELRGLARWRSRFQIIGLDE
KLMDGVTESIGMLVVQVERFSRVAATVLYLDGDSQHEESSHKWTDYVCFKIPDGSINEKN
CIGVIKDSGNCCTALSMSSLSGFLLHMPDEYECVDLSFYKDNQIVLLLSERSHSDSPGRS
WMVMLQTQNLSFTLLSGTFPTNIYSLQKLVALDLQLDTDYGKVRSIPHTVSTPLAVSASR
GVACVFSSRRHALVYILDEDEDEDEDEDGVSDME
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcagatggaggaggcatccacggcagcggcggcggccacgccgttccag
ctccagttcgacaagcccatcccgttccagataaaaatggcagaatggaatccagagaag
gatctgcttgctatggttactgatgactccaaggttctcctccatcgcttcaattggcaa
aggctatggacaatctctccagggaagtgcatcacatctatttgctggagccctgatggt
aaaataatagcacttggcacagaagatggtttggttcttttgcatgatgttgagaatggg
aagatgctaagaactataaagtcccacgatgttgccattgtatgtttgaactgggcagaa
gatgatctactatcaacgcctgacaaggatgattttttaccctatgaagaccgcaccgct
cgtttctttcctcctgctcctgtgatgcctaggataggtggattaagttctggagatact
ggtcttgcggatgaaaatgaagaagccattccacaattttgtagtgcttcctgtcagcgt
tttaacatcctatgcagtggtggtaaagatggttgcgtttgcttcagcatttttggaata
tttcctgttggaaagataaacataaataagattccaatcattgttgaatcctctggaaaa
aagaattatcaactccaggatgcttcagtaagcaaggtctctttatcaagaaacctccag
aaattggttcttctgtgctacggaaagttgattgacaccgaaaacctttctcacaactgt
aatactgctggattacattgtctctacctagatacatctatctttttcaaccgaaaaaat
gagctgcatcaggtgtcccaacaagcatcgagtattcaagatctggttgaagttgtccgt
gcttccatatctttgatatccaaacaatggtcaagtgctatgaatttatttcatgagaaa
tttagggccttgcccaatctgatagctgcacatggagtggaatctagttccgaggatgaa
tttctaagccttttgtttgggacacgaacaagtccagcacttcaccaatttttagcgagt
tcacttggcgaagcaggtctcaagaggatagccaaggctgttgacagtgctggaagagaa
attcgtggcattgtcagtgagcatcttcagcctgctgtcgagattatttcattcagactt
gcagaattaagaggccttgcaagatggcgttcacggtttcaaattatcgggttagatgaa
aagcttatggatggtgtaactgagagtatagggatgttagttgttcaagttgagcgcttt
tcaagggttgcagctactgttctttatctggatggagattcacaacatgaggaatcctca
cataaatggactgattatgtatgcttcaagatacctgatggatcaattaatgaaaaaaat
tgcatcggtgtcataaaggactccggtaactgttgtactgctctcagcatgtcgtcactt
tcagggtttctattgcatatgcctgacgaatatgagtgtgttgacttatcgttttataag
gacaatcaaattgttttactacttagtgaaaggtctcattctgatagccctggaagatct
tggatggtgatgctgcagacacagaacctttccttcacgctgctctcaggaacattcccc
acaaatatttacagtctgcaaaaactggtggcactggatcttcaattggacacagattat
gggaaagttcgtagcatacctcacactgtatctactccacttgcagtcagtgcatcaaga
ggagttgcatgtgtcttttcatctcggaggcatgccttggtttatatccttgatgaggat
gaggacgaggatgaggatgaggacggagtttctgatatggagtga
DBGET
integrated database retrieval system
