Panicum virgatum (switchgrass): 120657466
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Entry
120657466 CDS
T07260
Name
(RefSeq) translation initiation factor IF3-4, chloroplastic-like isoform X1
KO
K02520
translation initiation factor IF-3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120657466
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120657466
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
MTIFs
120657466
Prokaryotic type
120657466
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120657466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF3_C
IF3_N
Motif
Other DBs
NCBI-GeneID:
120657466
NCBI-ProteinID:
XP_039791712
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Position
1N:complement(64560994..64564152)
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AA seq
333 aa
AA seq
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MVGVAFAPAVSRAPYRPGAVSNASGPSSSARFPARPWARVPAPARLVVVARYSSSYESDG
EEDEEALGGGGWGRRDRGPDPDSDPALDIERIESSTVRLLDEQKRMVINAHISFCSFTDF
RFNYLFIWPFHFILLLQVGVVSVNEAVQIADDNDLILAILSLDGDPPVLRLFEERDYKKH
RYEQQKKKKIQQKRSVAKRMGLKELKMGYNIDVHDYSVRLKAARKFLKAGDKVKIIVNLK
GRENLYKKEAIELLRRFQNDVGELATEESKNFVERNIYVVLVPNKIAIQKEQDELNRKDT
AKEEKDQSDSDDGLLTEQLEESKEPEAELSANV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgtcgccttcgctccggcagtgtcccgagcaccttacaggcccggcgccgta
tccaacgcatcgggcccctcctcctcggcgcggttcccggccaggccgtgggcgcgggtg
ccggcgccggcgaggctcgtcgtggtcgcgcggtactcgtcctcgtacgagagcgacggg
gaggaggatgaggaggcgctcggaggcggcgggtggggaaggagggaccgcgggcccgac
cccgactccgaccccgcccttgacattgaacgaatcgagtcctcgactgtaaggctcctg
gatgaacagaaaagaatggtaatcaatgctcatatctcattctgcagcttcactgatttt
cgatttaattatctgttcatttggccgttccacttcattcttctcctacaggttggcgtg
gtatctgtaaacgaggcagttcaaattgcagacgacaatgaccttatactggcaatatta
tcattagatggagatcccccagtacttcgactctttgaggagagagattacaaaaagcac
aggtatgaacagcagaagaagaaaaagattcagcagaaaagatctgttgcaaaacgcatg
ggcttgaaggagttgaaaatgggatacaacattgatgtccatgattacagtgtgaggctt
aaagctgcaagaaagtttcttaaagctggagacaaggttaagataattgtgaacttgaaa
ggacgggaaaacttgtataaaaaagaagctattgaactcctgagaagattccaaaatgat
gttggtgagctagcgacggaagaaagtaaaaattttgtagagaggaatatatatgtggtt
cttgttcccaataagatagctatacagaaagagcaggatgagttgaacagaaaggatact
gcaaaagaagagaaagaccaatcagacagtgatgatggacttctgacagagcaactggag
gaaagtaaggagcctgaggcagaactctcagcaaatgtttga
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