Panicum virgatum (switchgrass): 120657619
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Entry
120657619 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA thiolase 2, peroxisomal-like
KO
K07513
acetyl-CoA acyltransferase 1 [EC:
2.3.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00280
Valine, leucine and isoleucine degradation
pvir00592
alpha-Linolenic acid metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120657619
00592 alpha-Linolenic acid metabolism
120657619
01040 Biosynthesis of unsaturated fatty acids
120657619
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120657619
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120657619
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
120657619
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Motif
Pfam:
Thiolase_N
Thiolase_C
Thiolase_C_1
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
120657619
NCBI-ProteinID:
XP_039791926
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Position
1N:complement(65869124..65873138)
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AA seq
459 aa
AA seq
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MEKAIDRQRVLLAHLVPSSSSSRPQLEASACAAGDSAAYQRTSSFGDDVVVVAAYRTPIC
KAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGDIGDIVVGTVLGPGSQRANECRMAAFYA
GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSINSIAWEGQVNPKI
SAFQKAQDCLLPMGITSENVAHRYGVTRQEQDQAAAESHRRAAAATASGKFKDEIVPVPT
KIVDPKTGEEKKVVISVDDGIRPGTTASGLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLL
MKRSVALKKGLPILGVFRSFAAVGVDPAVMGVGPAVAIPAAVKSAGLQIEDIDLFELNEA
FASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGVVT
MCIGSGMGAAAVFERGDTVDELSNVRDIQSHSFLSRDAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcgatcgaccggcagcgggtcctcctcgcccacctcgtcccctcctcctcg
tcctcgcggccgcagctggaggcgtcggcgtgcgcggccggggacagcgccgcgtaccag
aggacctcctccttcggagatgatgttgtcgtcgtcgctgcataccggacgccgatatgc
aaggccaagcgagggggtttcaaggacacgtacccagaggacctccttactgttgttctc
aaggctgttctggacaacactaaaatcaatccaggtgacattggtgacattgtggttggg
acggtgctaggtccaggttcgcagcgagcaaatgagtgcagaatggctgctttctatgct
ggattccctgaaactgttcctgtgagaactgtcaaccgacaatgctcatctgggttacag
gcagtagctgatgtcgccgccgctataaaggctggtttctatgacatagggattggtgct
ggtttggaatccatgtcgataaattccattgcttgggaaggacaagtaaacccaaaaata
agtgcattccagaaagcacaggattgtcttctgcccatgggaattacttctgaaaatgtt
gctcatcgatatggtgtcaccaggcaagagcaagatcaggctgctgccgagtctcataga
agagctgctgcagccacggcttctggaaaatttaaggatgagatcgtccctgtgccaaca
aagatcgttgatcctaaaactggagaggagaagaaagttgtgatatctgttgatgatgga
attaggccaggcaccacagcatctggattggggaagcttaaaccagttttcaaaaaggat
gggactacaactgcaggcaattctagtcaagtgagtgatggtgctggagctgttctccta
atgaagagatctgtagctctgaagaaaggacttcctattcttggtgttttcaggagcttt
gctgctgttggagtggacccagctgttatgggtgttggtcctgctgttgccattcctgct
gcagtgaagtctgctggccttcagattgaagacattgatctctttgaactgaatgaggca
tttgcctctcaatttgtctattgttgcaataagctgggactagaccgttccaaagtaaat
gtgaatggaggtgcgattgcccttggacaccctctgggtgcaacaggtgcgcggtgtgtg
gctactcttctgaacgaaatgaagcgccgaggaagagactgccgatttggtgttgtaacc
atgtgcatcggatctgggatgggtgcagcagctgtgtttgagcggggagacacggtggat
gaactctccaacgtccgggacatccagtcacacagttttctatcaagggatgcaaagtag
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