Panicum virgatum (switchgrass): 120657664
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Entry
120657664 CDS
T07260
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120657664
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120657664
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120657664
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120657664
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
120657664
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
120657664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Trehalose_PPase
TetR_C_23
Motif
Other DBs
NCBI-GeneID:
120657664
NCBI-ProteinID:
XP_039791997
LinkDB
All DBs
Position
1N:66162765..66165885
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AA seq
328 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDVDSLSELRPVYGLIFLFKWIPGEKDE
RPVVRDPNPNLFFAQQVINNACATQAILSVLMNRPEINIGPELSQLKEFTGAFTPDLRGL
AISNSESIRTAHNSFARPEPFISDEQRAATKDDDVYHFISYLPFEGVLYELDGLKEGPVN
LGQCDGSDDLDWLRMVQPVIQERIERYSQSEIRFNLMAIIKNRKEVYSAELEELEKRREQ
ILQEINNTSATESLNNSLTEVISAIETVSEKIIMEEEKFKKWKTENIRRKHNYIPFLFNL
LKVLAEKQQLKPLVEKAKQQKSSSSGTK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtgcacgattgagtctgaccctggtgttttcaccgagttgattcagcaaatg
caagtgaaaggtgtgcaggtggaagagctttactctcttgatgtggactctcttagcgaa
ctgcggccagtatacgggctaatttttctcttcaagtggatacctggggaaaaggatgaa
cggcctgttgtcagagatcctaatccaaaccttttctttgctcagcaagtcatcaataat
gcatgtgctactcaagctattctctcagttctcatgaatcgcccagaaattaacataggt
ccagaactatctcaactgaaggaattcacaggagctttcacacctgatctgaggggctta
gctatcagcaacagcgaatctattcggacagctcataacagttttgctaggccagagccg
ttcatttcagatgagcagagagcagcgactaaggatgatgatgtgtaccatttcataagt
tatttaccttttgaaggtgtcctctatgagctggatgggctgaaggaaggacctgtgaac
cttgggcagtgcgatggttctgatgaccttgattggctacggatggtgcagccagttatt
caagaaaggatcgaacgctattcacagagtgagattaggttcaatctcatggcaattata
aagaataggaaagaggtgtacagtgccgagctggaggaactggagaagagaagggagcaa
attttgcaggagataaacaatacttctgccacagaatccttgaacaactcgcttacagag
gtgatatcagcaattgagacagttagcgagaagatcatcatggaagaagagaagtttaag
aagtggaagacggagaacatccggaggaagcacaactacatcccgttcctgttcaacctg
ttgaaggtgctcgcagagaagcagcagctaaaacctctggtcgagaaggccaaacagcaa
aagtcttcaagctctggcactaaatga
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integrated database retrieval system
