Panicum virgatum (switchgrass): 120657689
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Entry
120657689 CDS
T07260
Name
(RefSeq) ABC transporter F family member 3-like
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120657689
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120657689
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
PWI_ABCF3
SMC_N
AAA_15
AAA
NACHT
AAA_16
GTP-bdg_M
RsgA_GTPase
AAA_23
AAA_29
AAA_33
Motif
Other DBs
NCBI-GeneID:
120657689
NCBI-ProteinID:
XP_039792027
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All DBs
Position
1N:complement(66335125..66341912)
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AA seq
720 aa
AA seq
DB search
MAAAAAASMGVVREVLGPDVVEEVDQPIIDYIANVLADEDFDFGAPDGHGIFEALGELLI
DSGCVSSQDHCLQVCSKLCEKFGKHGLVKPKQAVRSLVTPLRMNAGMDDDVAPKKQPEVF
EGPLLSSRDKAKIERKKRKDERQREAQYQMHVAEMEALRAGMPPVFVNHNNDGGPAVRDI
HMENFSVTVGGRDLIQEATITLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGVPKNCQIL
HVEQEVVGDDTTALQCVLNADVERVQLQQEEARLVQQQKDLEIEAEFGQGSGKSKGDLDK
DSISKRLEEIYKRLEFIDADAAEARAASILAGLSFTPEMQRKRTKEFSGGWRMRIALARA
LFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDILHLHGRK
LHAYKGDYDTFERTREEHLKNQQKAFETNEKARSHMQAFIDKFRYNAKRASLVQSRIKAL
ERMEHVDAVVSDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPTLFKNLNFGIDLDSRI
AMVGPNGIGKSTILKLISGDLQPTSGTVFRSPKVRMAVFNQHHVDGLDLTVNPLLYMMRC
YPGVPEQKLRAHLGSFGVSGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL
DLDAVEALIQGLLVFQGGVLMVSHDEHLITGSVDELWVVSEGRVTPFSGTFKDYKKLLKP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgctgcggcgagcatgggggtcgtgcgggaggtcctgggccccgacgtc
gtcgaggaggtggaccagcccatcatcgactacatcgccaacgtcctcgccgacgaggac
ttcgacttcggcgcccccgacggccacggcatcttcgaagcgctcggagagctcctcatc
gactccgggtgcgtctccagccaggaccactgcctccaggtctgcagtaagctttgcgaa
aagtttgggaagcatggtctcgtgaaacccaaacaagctgtgcgtagccttgttacaccg
ttacgtatgaatgcggggatggacgacgatgttgctccgaaaaagcaacctgaagtattc
gagggaccgttgctatcttcacgtgataaagccaagattgaacggaaaaaaagaaaggat
gagaggcagagagaggcacaatatcaaatgcatgtcgcagagatggaggcacttagggct
ggaatgcctcctgtatttgtaaatcacaataatgatggtgggccagctgttagggatata
catatggagaacttcagtgtcactgttggcggccgtgatcttattcaggaagccactata
acacttgcttttggaaggcactatggccttgttggaagaaatggtactggaaagacatct
ttcctcagagctatggcgatgcatgcaattgatggtgttcccaaaaactgtcaaatattg
catgttgagcaggaggtcgtgggtgatgacaccacggctttgcagtgtgttctgaatgct
gatgttgaacgagttcaacttcagcaggaagaggcccgtctggttcaacaacagaaagac
ctagagattgaggctgagttcgggcagggctcgggcaagagcaagggtgatcttgacaaa
gattctatcagcaagaggcttgaggagatatataaacggctagagtttatcgatgcagat
gctgcagaggctcgcgctgcatcgattttggcgggtcttagtttcactccagaaatgcaa
cgcaaacgtacaaaagagttttctggtggatggcgcatgagaatagctctagcacgtgct
cttttcattgagcctgatttactactactcgatgagccaacaaaccatcttgatcttcac
gctgtgttatggctagaaacgtatctcctgaagtggccaaagacatttattgttgtatcg
cacgctagggagtttttgaatacggttgtcaccgacattcttcatctacatggtagaaag
ctacatgcatacaaaggtgactatgacacatttgagaggactcgggaagagcaccttaag
aatcagcagaaagcctttgaaacaaatgagaaagccagatcccacatgcaggcattcatt
gacaagttccggtataatgcaaagagagcatcgcttgttcaatcaagaatcaaggctttg
gagcgaatggaacatgttgatgcagttgtcagtgatccagactataaatttgagttccca
accccagatgatcgccctggaccaccaatcattagcttcagtgatgcctcgtttggttac
cctggagggcctactttgtttaagaatttgaattttggtattgacctcgacagtcgtata
gcaatggttggtcctaatggcattggcaagtctactatactgaaattaatatctggagat
ctgcagccaacttcaggaacagtattccgctcccccaaggtccgcatggctgtattcaac
caacatcatgttgatgggcttgatttaactgtgaatccccttctgtacatgatgaggtgc
tatccgggtgtacctgagcagaagttgagggcacatctgggttcctttggtgtttcagga
aatcttgccctccaacctatgtataccttgtcaggtggtcagaagagtagggttgcattc
gcgaaaatcaccttcaagaaaccacacattatacttctcgatgagccttctaaccatctg
gatctggacgcagtcgaggcgctcatccaaggtttactggtgttccagggtggagtgcta
atggtgagtcacgacgagcatctcatcactggaagcgtggacgagctttgggtggtgtcg
gagggcagggtgaccccattctcaggcacgttcaaggattacaagaagctgctcaagcct
tag
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