Panicum virgatum (switchgrass): 120657734
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Entry
120657734 CDS
T07260
Name
(RefSeq) callose synthase 3-like isoform X1
KO
K11000
callose synthase [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120657734
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120657734
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glucan_synthase
FKS1_dom1
Vta1
Motif
Other DBs
NCBI-GeneID:
120657734
NCBI-ProteinID:
XP_039792088
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Position
1N:66733117..66759264
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AA seq
1955 aa
AA seq
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MASSSGGRRMAPGGDSSSASPASAAGRRILRTQTAGNLGESIFDSEVVPSSLVEIAPILR
VANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLERENDPTLKGRVK
QSDAREMQSFYQHYYKKYIQALQNAADKADRAQLTKAYQTAAVLFEVLKAVNVSQKIEVD
QSILETHNQVEEKKKLYLPYNILPLDPDSTNQAIMRYPEIQAAFQALRNTRGLPWPKEHD
KKPDADLLGWLQAMFGFQKDNVSNQREHLILLLANVHIRQIPKPDQQPKLDDRALDAVMK
KLFKNYKRWCKYLGRKSSLWLPTIQQEVQQRKLLYMGLYLLIWGEAANLRFMPECLCYIY
HHMAFELYGMLAGNVSPTTGENVKPAYGGEEEAFLKKVVTPIYKVIEKEAERSKTIKSKH
SHWRNYDDLNEYFWSRYCFRLGWPMRADADFFKTPNDVPRHLANGEDRPAGNDNWMGKVN
FVEIRSFWHIFRSFDRMWSFLILSLQAMIIIAWNGGTPSDIFDRGVFKQVLSIFITAAIL
KLCQAILDIILSWKARKNMSLVVKLRYILKLLSAAAWVVILPVTYAYTWENPTGLARTIK
SWLGDGQNQPSLYILAVVVYLAPNMLSAMLFLFPVIRRALERSNLKVVTFMMWWSQPRLF
VGRGMHEGAFSLFKYTMFWVLLLATKLIVSFYVEIKPLVQPTKDIMKEPIRTFQWHEFFP
HANNNIGVVIALWAPIILVYFMDTQIWYAIFSTLIGGIYGACRRLGEIRTLGMLRSRFES
LPKAFNQCLIPSDTSKKRGFRAAFSSKPSKTPEGTKEEEKIAARFAQIWNLIITSFREED
LIDNREKDLLLVPYCKDRDMDIIQWPPFLLASKIPIALDMAADSGGKDRDLKKRMKSDPY
FTYAIKECYASFKNIIYALVIGPREREVIQKIFNVVDEHIAEDTLIKELNMSNLPTLSKK
FIELLDLLQNNNKEDQGQVIILFQDMLEVVTRDIMDIMDEQLSGLMESVHGGNYRRHEGI
TPLDQQDQLFTKAIDFPVKKTQAWTEKIKRLHLLLTVKESAMDVPTNLDARRRISFFANS
LFMSMPSAPKVRQMLPFSVLTPYYTEDVLFSSQALEEQNEDGVSILFYLQKIYPDEWKNF
LERVDCKTEEELRETEQSEEELRLWASYRGQTLTRTVRGMMYYRQALVLQAFLDMARDED
LMEGFRAADLLSDESQLLLQCKAITDMKFTYVVSCQQYGIQKRSGDARAQDILRLMTTYP
SLRVAYIDEVEEPSKDRNKKIEKVYYSALVKAAVTKPDDPGQKLDQDIYRIKLPGNAMLG
EGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRNLLQEFLKKHDGVRYPSILGVRE
HIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKAS
KIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRD
VYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGKRFI
HNEPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGT
KTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVYEIFGQ
SYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPP
EKSWESWWEKEQEPLRLSGKRGIVLEIVLALRFFIYQYGLVYHLNITTHTKSVLVYCLSW
VVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFISIIIILIAIPHMTVQDIFVC
ILAFMPTGWGLLLIAQAIKPAITGVGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVS
EFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcctccgggggccgcaggatggcccctggcggagactcctcctccgcctcc
cccgcctccgccgccggccggaggatcctccgcacccagaccgctggcaacctcggcgag
tccatcttcgacagcgaggtcgtcccatcctcgctcgtcgagatcgcgcccatcctgcgg
gtggccaacgaggtggaggccagcaacccgcgagtagcctacctctgccgcttctacgcc
ttcgagaaggcgcatcgcctcgacccgacctccagcggcagaggtgtccgccagttcaaa
accgcgctcctgcagaggctcgagagggagaacgatcccacgctcaagggcagggtcaaa
cagagtgacgccagagaaatgcagagcttctaccagcactactacaagaagtacatccag
gcgcttcaaaatgccgctgataaggccgaccgggctcagctcacgaaagcttatcaaacg
gctgccgtgcttttcgaggtcctcaaagccgtcaatgtctcccagaaaatcgaagttgat
caatcgattctggagacacataaccaagtcgaggaaaagaagaagttatatctcccgtac
aatatcctcccgctcgatcctgacagcaccaaccaggctatcatgcgctatcccgagatc
caagctgctttccaggctctccgtaacaccagaggtctgccatggcccaaggaacacgac
aagaaacctgacgcagatcttcttggttggcttcaggccatgtttggattccagaaagat
aatgtatccaatcagagggagcatctcatactcttgcttgcaaacgttcacatcagacag
attcccaaacctgaccaacagccaaagttggatgaccgagcactggatgcagtaatgaag
aagctatttaagaattacaagagatggtgcaaatatcttggccgcaaaagcagcttatgg
ttgccgactatccaacaggaggtacaacaacgcaagctcctctatatgggcctttatctg
ctcatatggggcgaggcagctaatctaagattcatgccggagtgtctttgctatatttat
catcatatggcttttgaactatatggtatgttggctggaaatgtgagcccgacaactggt
gaaaatgttaaaccagcttatggtggagaagaagaagccttcttgaagaaagttgtgact
ccaatctacaaagttatagagaaggaagctgagaggagcaagaccataaaatcgaagcac
tcacactggagaaactacgatgatctaaatgaatacttttggtcaagatattgcttccga
ttggggtggcctatgagagctgatgcagattttttcaagactccaaatgatgttcctcgt
caccttgcgaatggggaggacagacccgctggtaatgacaattggatgggaaaagtcaat
tttgttgaaatacggtcattttggcacatattccgcagctttgataggatgtggagcttc
ttaattttatctttacaggccatgattataattgcttggaacggtggcacaccaagtgat
atcttcgaccgtggagtatttaaacaggttttgagcatatttataactgctgctatactg
aaattgtgtcaagcaatcctggacattatcttaagctggaaagcaagaaaaaacatgtct
cttgttgttaagctacgctacatcttgaagttactatcagctgctgcttgggttgtgatt
ttgcctgtaacttatgcatacacctgggagaatccaactggtcttgcaaggacaattaaa
agttggcttggtgatggccagaatcagccatcattgtacattttggcagttgtggtttac
ttggcaccaaacatgctgtcggctatgctatttcttttccctgtgattaggagagccctc
gagagatcaaatcttaaagtggtaacattcatgatgtggtggtcacagcctcgtttattt
gttggaagaggaatgcatgaaggcgcattctcccttttcaagtatacaatgttttgggtc
ttgcttttagccacaaaattgattgtgagcttttacgtggagatcaaaccacttgtgcag
ccaacaaaagatataatgaaggagccaatacggacatttcagtggcatgagtttttcccc
catgcaaataacaacattggtgttgtcattgcgctttgggctcctatcattcttgtctat
ttcatggatactcagatttggtatgcaattttctcgacactaattggtggtatctatggg
gcctgtcgccgtcttggtgagataaggacattgggaatgttgagatctcggtttgaatct
ctgcctaaggctttcaaccaatgcttgattccatctgacacaagcaagaagagaggattt
cgggctgctttctccagtaaaccgtctaagacacctgagggcaccaaagaagaagaaaaa
atagcagcaagatttgctcagatttggaatctaattatcacaagctttcgtgaggaagat
ctgatagacaacagagagaaggacttattacttgttccatactgcaaagaccgagatatg
gatataatccaatggccgccgttcctgcttgccagcaagattccaattgcattggatatg
gcagcagatagtggaggaaaagatcgtgatctaaagaagaggatgaaatcagacccatat
tttacttatgctatcaaggaatgttacgcttccttcaaaaacatcatatacgctctagtg
attggtccacgagagagagaagtgatacaaaagattttcaacgtggtggatgagcatata
gcagaagacactctgataaaggagctgaatatgagtaaccttcctaccctgagcaagaag
tttattgagctgcttgacttactgcaaaacaataacaaagaggaccagggccaggtcatc
atattgtttcaggatatgctcgaagtggttacaagggacataatggacataatggatgag
caactcagcggactgatggaatcagtacatggtggaaattatagaagacacgaagggatt
acacctcttgatcagcaagatcagttgttcacaaaagccattgattttcctgtaaagaaa
acacaggcatggactgaaaagataaaaaggcttcaccttctgctcacagtgaaagaatca
gctatggatgtccctacgaacctggatgccagaaggaggatatctttctttgctaattct
ctttttatgtctatgccaagtgctcctaaagtgcggcaaatgttgcccttctctgtcttg
actccttattatacagaagacgttcttttctcttcacaagcactagaggaacagaatgag
gatggagtttctattcttttctacttgcaaaaaatctacccagatgaatggaaaaatttt
cttgaaagagtggattgcaagactgaagaggaactccgtgaaactgagcaatctgaagag
gagcttcgcctttgggcatcataccggggacaaactttgacaagaactgtaagagggatg
atgtactacagacaagctttagtccttcaggctttccttgatatggccagagatgaagat
cttatggaaggcttcagagcagctgatctgttatctgatgagtcacaactattgcttcaa
tgcaaagctataactgacatgaaattcacatatgttgtatcatgccagcaatatggtatc
cagaaacgatctggtgatgcacgcgcgcaggatattctaagattgatgacaacttacccg
tcacttagggttgcctatatcgatgaagttgaagagcctagcaaagacagaaataagaaa
atagagaaggtttactactctgcattggtgaaggcagcagtaacaaagcctgatgatcct
ggccagaaacttgatcaggatatatataggataaagcttccaggtaatgcaatgctaggt
gaaggaaaaccagaaaaccagaaccatgccataatcttcacgcgaggtgaaggtctccaa
accattgacatgaatcaggaacattatatggaggagactttaaaaatgaggaatttgttg
caagagtttctgaagaaacatgatggtgttaggtatccatcaatacttggtgttcgagaa
catatcttcaccggcagtgtttcctctcttgcatggttcatgtcaaaccaagaaacgagt
tttgtgactattggacagcgtgtactcgctaatcctttgagggttcgatttcattacggg
catcctgatatctttgatcggcttttccacctcacaaggggaggtgtaagcaaagcttct
aagattatcaatcttagtgaggacatatttgctggatttaattcaacattgcgtgaagga
aatgttacacatcatgaatacatgcaagttggcaagggaagagatgttggtctcaatcag
atttcactgtttgaagcaaaaatagcaaatggtaatggtgaacagacactgagtcgcgac
gtctaccgacttggacatcgttttgacttcttcagaatgttgtcatgctactatactact
attggcttttacttcagtacaatgataacagtttggacagtgtatgtattcctctatggg
cgcctttatcttgttctcagtggcctggacgaagcactagccactggaaagcggtttata
cacaatgaacctctccaggttgctctagcttcacagtcttttgtgcagcttgggttcttg
atggcgctgcctatgatgatggaaattggtctagagagaggattcagaactgcgctgagt
gactttgtacttatgcaactgcaactagcatctgtgttcttcacattctcccttgggacc
aaaactcactactacggaactacactgctacatggaggagctgaatatagagctaccggg
cgtggatttgtggtgttccatgccaaatttgctgagaattatcgactgtactcgcgaagc
cattttgtcaagggcatcgagctgatgattttgcttattgtgtatgaaatatttgggcag
tcataccgaggagctattgcgtacattttcatcacgttctccatgtggtttatggttgtc
acctggctctttgcaccattcctttttaatccttctgggttcgagtggcagaaaatcgtg
gatgactggactgactggaataagtggatcagtaaccgtggtggtattggtgtaccgccg
gagaaaagttgggagtcatggtgggaaaaggagcaggagcctcttagactttctggaaag
cgtggcattgtccttgaaatagtgctcgcattgcgcttctttatataccagtatggtctt
gtctatcatctgaacatcaccacgcacacaaagagtgttctggtttattgcctctcgtgg
gttgtaatctttgtgattttgctcgtgatgaagactgtatcagttgggaggcggagattc
agtgcagagttccagcttgtcttccggttgatcaaggggctgatattcataacatttatc
tccatcatcataatcttgatagcaatcccacacatgacagttcaagacatctttgtttgc
atccttgcgttcatgcccactggatggggtttgcttttgattgcgcaggctatcaagcca
gctatcacaggtgtggggctgtggggttcgatcaaggcgcttgcccgaggctatgagatc
atcatgggcctgctgttgttcaccccgattgcgttccttgcttggttcccgtttgtttcg
gagttccagacaaggatgctgttcaaccaggccttcagtagaggtctgcagatctcgcgc
attctaggcgggcacaagaaagaccgggcaacacggaacaaggagtag
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integrated database retrieval system
