Panicum virgatum (switchgrass): 120657866
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Entry
120657866 CDS
T07260
Name
(RefSeq) endoglucanase 8-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120657866
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120657866
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120657866
NCBI-ProteinID:
XP_039792112
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Position
1K:53379606..53381592
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AA seq
496 aa
AA seq
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MRALKHGTMRAHVALALAAMVLAGDALQPALAAGGFNYHDALTKSIIFLEAQRSGKLPPN
NRVKWRGDSGLEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTALAFKPELESAK
EMEHVNEALRWGTDYLLKCAARKKKLWVQVGDPNLDHQCWVRPENMKAPRTLYEIDEKTP
GTEIAAETAAAFAAASMVFRNDQKYSRALLNKAKLLFLFAKSHQGSYDGECPFYCSYSGY
NDELLWAATWLYLATKRQLYADYISHEAISSSVAEFSWDLKFPGAQVLLAELNMTSGGGA
QSFKTQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANTQYVTSTAFLFIVYSDLLLRTG
QSVLCGSQPIRPERLREFARQQMDYLLGANPRGSSYVVGFGANPPTQPHHRGASTPVLPP
GYDVNCGLSFGEWFAPDRPNPNELTGAIMGGPDKDDKFVDKRANSSYTEPCTYINSLAIG
PLAALAVRGAQLVATH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcactcaagcacggcaccatgcgcgcacacgtcgccctggccctcgcggcgatg
gtgctcgccggcgacgccctgcagccggcgctggccgccggcgggttcaactaccacgac
gccctcaccaagtccatcatattcctcgaggcgcagcgctccgggaagctgccgcccaac
aaccgcgtcaagtggcgcggcgactccggcctcgaagacggcaagctcgccaatgtggat
ctcaccggtggatactacgacgccggcgacaacgtcaagtacgggctcccgctggccttc
acggtgacgacgctggcgtggacggcgctggcgttcaagcccgagctggagtcggccaag
gagatggagcatgtgaacgaggccctcaggtggggcaccgactacttgctcaagtgcgcc
gcgaggaagaagaagctgtgggtgcaggtcggcgaccccaacctggaccaccagtgctgg
gtgcgtccggagaacatgaaggcgccgcggacgctgtacgagatcgacgagaagacgccc
gggacggagatcgccgccgagaccgccgccgccttcgccgccgcctccatggtgttccgc
aacgaccagaagtactctcgcgccctgctcaacaaggccaagctgctgttcctcttcgcc
aagagccaccagggcagctacgacggcgagtgccccttctactgctcctactccggctac
aacgacgagctgctgtgggccgccacgtggctgtacctggcgacgaagcggcagctgtac
gccgactacatctcccacgaggccatctcgtcgagcgtggccgagttcagctgggacctc
aagttccccggcgcgcaggtcctgctggccgagttgaacatgacctccggcggcggcgcg
cagagcttcaagacccaggccgacaacttcgtgtgcgccgtgctcccggacacggcgttc
caccaggtgttcatcaccccgggcggcgtgatccacctccgcgacggcgccaacacgcag
tacgtgaccagcacggccttcctcttcatcgtgtacagcgacctgctgctgcgcacgggg
cagagcgtgctgtgcgggagccagcccatccggccggagcgcctccgggagttcgcccgg
cagcagatggactacctgctgggcgccaacccgcgcgggagctcctacgtcgtgggcttc
ggcgccaacccgcccacgcagccgcaccaccggggggcctccaccccggtgctcccgccc
gggtacgacgtcaactgcgggctcagcttcggggagtggttcgcgcccgaccggcccaac
cccaacgagctcaccggcgccatcatgggcgggcccgacaaggacgacaagttcgtggac
aagcgcgccaactcctcctacaccgagccctgcacctacatcaactccctcgccatcggc
ccgctcgccgcgctcgccgtccgcggcgcgcagctcgtcgccacgcactga
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