Panicum virgatum (switchgrass): 120658126
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Entry
120658126 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 18 isoform X1
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120658126
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120658126
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120658126
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120658126
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120658126
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Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_8
SPARC_Ca_bdg
Kinase-like
Kdo
ABC1
EH
RIO1
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
120658126
NCBI-ProteinID:
XP_039792273
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Position
2N:complement(15316324..15324642)
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AA seq
511 aa
AA seq
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MGLCSSSTAAADTPRRPGAAAGKRERDKGRGIVACGKRTDFGYDKDFEARYSLGKLLGHG
QFGYTFAAVDRASGDRVAVKRIDKNKMVLPVAVEDVKREVKILKALQGHENVVHFYNAFE
DDNFVYIVMELCEGGELLDRILAKKDSRYSEKDAAVIVRQMLKVAAECHLHGLVHRDMKP
ENFLFKSTKEDSPLKATDFGLSDFIRPGKQFRDIVGSAYYVAPEVLKRKSGPESDVWSIG
VITYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPNITPAAKDFVQKLLVKDPRARL
TAAQALSHDWVREGGKASEIPLDISVLHNMRQFVKYSRFKQFALRALASTLNSEELSDLR
DQFNAIDVDKNGTISLEELKQALAKDVPWRLKGPRVLEIIEAIDSNTDGLVDFEEFVAAT
LHVHQLVEHDTEKWKSLSQAAFDKFDVDGDGYITSDELRMHTGMKGSIDPLLEEADIDKD
GKISLDEFRRLLKTASMSARTVQTPRGVRMS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctgcagctcctccaccgcggccgcggacaccccccggcggcccggcgcggcg
gcggggaagagggagagggacaagggccgcgggatcgtggcgtgcggcaagcggacggac
ttcggctacgacaaggacttcgaggcgcggtactcgctcggcaagctgctgggccacggc
cagttcgggtacaccttcgccgccgtcgaccgcgcgtccggcgaccgcgtcgccgtcaag
cgcatcgacaagaacaagatggtccttcctgttgctgttgaagacgtaaagcgagaagtt
aaaatattgaaagccttacaagggcacgaaaacgtcgtacatttttacaatgcatttgaa
gatgacaactttgtgtatatagtcatggaattatgtgagggtggtgaattacttgatcgg
atattagccaagaaagatagccgttatagcgagaaagatgctgcagtaattgtccgacag
atgctcaaggttgcagctgagtgccacctgcatggtttggttcatcgggacatgaagcct
gagaacttcctattcaaatcaacaaaggaggactcaccccttaaggccacagattttggc
ctttcagatttcataagaccaggaaagcaattccgtgacattgttggaagtgcctactat
gtggccccagaagtactcaagcgtaagtcagggccagaatctgacgtttggagtataggc
gttattacctatattttgctgtgtggaagacggcctttctgggacaaaactgaagatgga
atatttaaagaggtattaaaaaacaagccagattttcgccgcaagccttggccaaatatt
actccagctgcaaaagattttgtacaaaagttactagttaaggatccccgtgcaagacta
actgctgcacaggcattatcacatgattgggtgagagaaggaggaaaggcatctgaaata
cccttggatatatcagtattgcataatatgcgacagtttgtgaaatatagccgtttcaag
caatttgctttaagggcattagcatctacactaaactcagaagagctgtctgatcttcgt
gatcagttcaatgccattgacgttgacaaaaatggaacaattagtctggaggaattgaag
caggctcttgcaaaggatgttccgtggagattaaagggtcctcgtgttttggagattatt
gaggcgattgatagtaatacagatggtctagttgattttgaagagttcgtggcggcaaca
ctacacgtgcatcagctggtggaacatgatactgaaaagtggaaatcattatctcaagct
gcatttgataaatttgatgttgatggcgatggctatatcacatctgatgaacttagaatg
catacaggaatgaagggttccattgaccccctcctagaggaggctgacattgacaaagat
ggcaaaataagcctagacgaattccgcaggctcttgaaaactgcaagcatgagcgcgcgc
actgtacaaactccgaggggcgttcgcatgtcatag
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