Panicum virgatum (switchgrass): 120658141
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Entry
120658141 CDS
T07260
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120658141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120658141
03036 Chromosome and associated proteins [BR:
pvir03036
]
120658141
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120658141
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120658141
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120658141
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120658141
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120658141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
DUF7263
Motif
Other DBs
NCBI-GeneID:
120658141
NCBI-ProteinID:
XP_039792315
LinkDB
All DBs
Position
2N:15639286..15655609
Genome browser
AA seq
979 aa
AA seq
DB search
MAAPPKAWKAEYAKSGRASCKSCRSPIAKDQLRLGKMVQATQFDGFMPMWNHAKCIFGKK
NQIKSVDDVEGIDALRWDDQEKIRNYVGSASAAISSTASVPDKCTVDVAPSARTSCRRCS
EKITKGTVRVSAKLEGQASKGIPWYHVNCFFEVSPSASVENFSGWDTLSDEDKRTVLDLV
KKDVGHNESTKGSKRKKGDSDMQSCKAPKLDGNTSEGAVQNKGKLVDPRDSNASSADMQQ
KLKEQSDTLWKLKDELKKHVSTAELRDMLEANEQDTSGPERHLLDRCADGMLFGALGPCP
VCSNGLYYYNGQYQCSGNVSEWSKCTYSTTEPVRVKKWQIPDGTDNDFLMKWFKSQKVKK
PERILPPMSPEKSGSKATLGARLLSSEGLDKLRFSVVGQSKEAVDESIQKLKHAGANFHA
RVAKDIDCLISCGELDNENAEVRKARRLKIPIVREQYIGECIRKNRKLPVDLYKVENTLE
SSKGGTVTVKVKGRSAVHESSGLQDTAHILEDGKSIYNTTLNMSDLARGVNSYYILQIIE
EDNGSECYVFRKWGRVGNEQIGSQKLEEMSKADAIQEFKRLFLEKTGNPWEAWERKTNFQ
KQPGKFYPLDIDYGVKQAPKLKDISEMKSSLAPQLLELMKMLFNVETYRAAMMEFEINMS
EMPLGKLSKENIQKGFEALTEIQNLLKNTADQPLAVRESLIVAASNRFFTLIPSIHPHII
HDEDELMIKAKMLEALQDIEIASKLVGFDSDSNESLDDKYMKLRCNITPLPHDSEDYKLV
ERYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGIL
SQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRGNPVGLMLLSEVALGDMYELK
KAMSMDKPPRGKHSTKGLGKTVPLELEFVNWRDDVVVPCGKPVPSSVRSSELLYNEYIVY
NTSQVKMQFLLKVRFHHKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccgaaggcctggaaggcggagtacgccaagtccgggcgggcctcgtgc
aagtcgtgccggtcccccatcgccaaggaccagctccgcctcggcaagatggtgcaggcg
acccagttcgacggcttcatgcccatgtggaaccatgctaaatgcatctttggtaagaag
aaccagataaaatctgttgatgatgttgaaggaatagatgcacttcgatgggatgatcaa
gagaagataaggaactatgttggaagtgcctcagctgctataagttccacagcttctgtt
cctgataaatgtaccgttgatgttgctccatctgctcgaacttcatgcagacgatgcagt
gaaaagattacaaaaggaacggtccgtgtttcagctaagcttgaaggtcaagcttccaag
ggtataccatggtatcatgtcaactgtttctttgaggtgtccccatctgcatctgttgag
aatttctcgggctgggatactttgtcagacgaggataaaaggactgtgcttgatctcgtt
aagaaagatgttggccataatgaatcaactaagggttccaagcgcaagaaaggcgacagt
gatatgcagagctgcaaagcgcccaagctagatggaaatacatcggaaggcgcagtacaa
aacaaaggaaaacttgttgacccacgtgattccaatgctagttctgctgatatgcaacaa
aagcttaaagagcaaagtgacacactttggaagttaaaggatgaacttaagaagcatgta
tcgactgctgaattaagggatatgcttgaagcaaatgagcaagatacgtctggaccagag
aggcacctattggaccgttgtgctgatggaatgctatttggagcattgggtccttgccca
gtctgctctaacggcctgtactattataatggtcagtaccaatgcagtggtaatgtgtca
gagtggtccaagtgtacatactctacaacagaacctgtacgcgttaagaagtggcaaatt
ccagatggaacagataatgattttcttatgaagtggttcaagtctcaaaaggttaagaaa
ccagagaggattcttccaccaatgtcacctgagaaatctggaagtaaagcaactctggga
gcacggttactctcttctgaaggattggataaattaaggttttctgttgtaggacaatct
aaagaagcggtagatgaatcgattcagaagctcaaacatgctggtgccaacttccatgcc
agggttgccaaagatattgattgcttaatttcatgtggtgagctcgacaatgagaatgct
gaagtcaggaaagcaaggaggctgaagataccgatcgtaagagagcaatacataggagaa
tgcattagaaaaaatagaaagcttccagttgatttgtataaagtagagaacaccttagag
tcctcgaaaggtggtactgtcactgttaaagtgaagggcagaagtgcagttcatgaatcc
tctggtttgcaagatacagctcatattcttgaagatggaaaaagcatttacaatacaacc
ttaaacatgtctgacttggcacgaggtgtgaacagctactatatactccagatcattgaa
gaggataatgggtctgaatgctatgtatttcgaaagtggggaagggttgggaatgaacaa
attggaagccaaaagctggaggagatgtcaaaagctgatgcaatccaggaattcaaaaga
ttatttcttgagaagactgggaacccatgggaagcttgggagcgaaaaactaattttcag
aagcagcctgggaaattttaccctcttgatattgattatggtgttaagcaggcgcccaaa
ctgaaagatatcagtgaaatgaaaagttctcttgctcctcagttgctggaactcatgaag
atgcttttcaacgtggaaacatatagagctgctatgatggaatttgaaattaatatgtcg
gaaatgcctcttgggaagctaagcaaggaaaacattcagaaaggattcgaagcgttaact
gagatacaaaatttgttgaagaacacagctgatcaaccactggctgttagagaaagctta
attgttgctgcgagcaatcggtttttcacccttattccttctatccatcctcacatcata
catgatgaggacgagttaatgatcaaagcgaaaatgcttgaagctctacaggatattgaa
attgcttctaagctagttggctttgatagtgatagcaatgaatcacttgatgataagtac
atgaagcttcgttgcaacatcaccccattgcctcatgatagtgaagattacaagttagtt
gagcgttatctcctcaacacacatgctcctactcacaaggactggtcactggaactagag
gaagttttttcacttgatcgagatggagaactaaataagtactcaagatacaaaaataat
ctgcataataagatgctattatggcatggttcaaggttgacaaattttgtggggattctt
agtcaaggactaaggatcgcacctcctgaggctcctgttacaggctatatgtttggcaaa
ggcctctactttgcagatttagtaagcaagagtgcacaatattgttatgttgataggggc
aatccagttggtttgatgcttctttctgaggttgctttaggagatatgtatgaactaaag
aaagccatgtccatggacaaacctccacgaggaaaacactccaccaagggcttaggcaaa
actgtgccgctggagttggagtttgtgaactggagggatgacgttgttgtcccctgcggc
aaaccagtgccatcatcagtcaggagctccgaactcctgtacaatgagtacatcgtctat
aacacatcccaggtgaagatgcagttcttgctgaaggtgcggttccatcacaagaggtga
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