Panicum virgatum (switchgrass): 120658209
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Entry
120658209 CDS
T07260
Name
(RefSeq) probable 26S proteasome non-ATPase regulatory subunit 3 isoform X1
KO
K03033
26S proteasome regulatory subunit N3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120658209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120658209
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120658209
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rpn3_C
PCI
DUF6366
Motif
Other DBs
NCBI-GeneID:
120658209
NCBI-ProteinID:
XP_039792383
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Position
2N:complement(55541586..55544576)
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AA seq
516 aa
AA seq
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MPEDVEMNDSQAPPAAAPAVSDAPAPAQSTLHHLKEIASVIEAGSLSKEVRRISRAVRLT
IALRRRLAARDVAAFLAFALPPSSEAFARLSALVPKEDGSEMDVDTAAPAAQVSIKHGLP
EIEIYCYLLVLIFLFDNKKYDEVCLGFSSTLLFVGKHTNLNFVYQAKTCAAASIARLKSL
NRRTVDVLASRLYSYYSYVHELTNTLAEIRGTLLALHRMATLHHDELGQETLLNLLLRNY
LHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPT
TARGFRIQCNKWGIIVRLLLGEIPERTVFMQKGMKAALTPYFELTNAVRVGDLELFRSVA
DKFSSTFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLNSENPVADAES
IVAKAIRDGAIDATIDHANSCMVSKETGDVYSTNEPQIAFNSRIAFCLNMHNEAVKALRF
PPNSHKEKESAEKRRERLQQEEELAKHMAEEDDDDF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggacgtcgagatgaacgactcccaggccccgcccgccgccgcccccgccgtt
agcgacgccccggcgcccgcgcagtccactctccaccatctgaaggagatcgcgtcggtg
attgaggccgggtcgctgagcaaggaggtccgccggatctcacgcgccgtccgcctgacc
atcgccctacgccgccgcctcgccgcccgcgacgttgctgccttcctggccttcgcgctg
cctccttcctcggaggccttcgcccgcctctccgccctcgtgcccaaggaagatgggagt
gaaatggatgttgatacggcagctccagcagctcaagtttcaatcaagcatggtcttcct
gagattgaaatttattgttacttgcttgtgcttattttcctttttgataataagaaatat
gacgaggtatgtctgggattttcatccactttgttatttgttgggaaacatactaatttg
aattttgtctatcaggctaaaacatgtgccgccgcaagcattgctcgtctgaagagtctt
aacaggagaacagttgatgttttagcttctaggctgtactcctattactcatatgtccat
gagcttaccaacacccttgctgagattcgtgggactctcctggcattgcacagaatggca
actttacaccatgatgagcttggtcaggaaactcttctcaatctgcttcttcgcaattac
ctgcactacaacttgtatgaccaggcagaaaagctaaggtcaaaggcgcctcgttttgaa
gcacattccaatcaacagttctgccggtatctcttttacttgggcaaaataaggacaatt
cagttggagtacactgatgctaaggaaagcctcttgcaagctgctagaaaggcacccact
acagctcgaggatttcggatccagtgcaacaaatggggcattattgtaaggctgctctta
ggagagattccagagagaactgttttcatgcagaaaggaatgaaagctgctttgacaccc
tattttgagcttacaaatgctgtccgagttggtgacctagagctattcagatctgtggca
gataaattttcaagcactttcagtgcagataggacccggaatttgatagtgaggctgcgc
cacaatgttatccggactggattgcgtaacatcagcatctcatactcaaggatttccctt
gctgatattgccaagaagctgaggttgaactctgagaaccctgtcgctgatgctgaaagc
attgtagccaaggccatcagggatggggcaattgatgccaccattgatcatgccaacagc
tgtatggtgtcgaaggagactggtgatgtctactcaactaatgagccacagatagctttc
aactcaaggatcgctttttgcctgaacatgcataacgaggcagtcaaggcgctaagattc
cctccgaactctcacaaggaaaaggagagtgctgagaagaggcgtgagaggctccagcag
gaggaagaactggcaaaacatatggccgaggaagatgatgatgatttctag
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