Panicum virgatum (switchgrass): 120658222
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Entry
120658222 CDS
T07260
Name
(RefSeq) phospholipase D delta-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120658222
00565 Ether lipid metabolism
120658222
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120658222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120658222
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120658222
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120658222
Endosome - Golgi transport
Others
Others
120658222
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
120658222
NCBI-ProteinID:
XP_039792393
LinkDB
All DBs
Position
2N:55644949..55651048
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AA seq
858 aa
AA seq
DB search
MASSAGGESPAKPVLLHGDLDLWILEARLLPNMDLFSEQVRRCFAACRPPTSCGPKQPLP
TTAATRGGGARQHHRKIITSDPYVTLSVADAVVARTAVIPNCQEPVWEERFAVPLAHRAA
ALEFQVKDNDTFGAQLIGTVTVPADLVARGEEVEDWYPIIGTNGKPYKPDTALRLRFRFQ
PIAENPAYRHGIPGDPDHSGIKDSYFPLRHGGQVTLYQDAHVREGDLPEIELENGKMFEH
NACWEDICHAILEAHHMIYIVGWSVYDKVRLVREGSPSRPLPEGGDLTLGDLLKFKSQEG
VRVCLLVWDDKTSHNKFFIKTGGVMATHDEETRKFFKHSSVICVLSPRYASNKLSIFKQQ
VVGTLFTHHQKCVLVDTQAWGNKRKVAAFIGGLDLCDGRYDTPEHRLFKDLDTAFENDYH
NPTFSAGAKGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKATKWRDRFRTVSHWKDDALI
KLERISWILSPSPNIPNDHPTLWVSKEEDPENWHVQVFRSIDSGSLKGFPSDSKEASKQN
LVCRKNLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGADNLIPIELAL
KIASKIRAGERFAVYVVIPMWPEGVPTASSVQEILFFQAQTMEMMYKIIADELKAMDIKD
LHPQDYLNFFCLGNREEPTSNGSLESEKSTDKSAAALATKYRRFMIYVHAKGMIVDDEYV
ILGSANINQRSLAGSRDTEIAMGAYQPHYAWSTKNRHPHGQVYGYRTSLWAEHLGMVDDR
FKDPSSLDCVRFVNQIAEENWQRFTAEEMGTLQGHLLKYPVKVEADGKIGSLPDQECFPD
VGGKILGAPTSLPDSLTM
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggccggcggcgagtctccggcgaagcccgtgctcctgcacggcgacctc
gacctctggatcctcgaggcgcgcctgctgcccaacatggacctcttctccgagcaggtc
cgccggtgcttcgccgcctgccgcccgcccacctcgtgcgggcccaagcaaccgctcccc
accaccgccgccacgcgaggcggcggcgcccgccagcaccaccggaagatcatcaccagc
gacccctacgtcacgctgtccgtggccgacgccgtcgtcgcgcgcaccgccgtcattccc
aactgccaggagcccgtctgggaggagcgcttcgctgtgccgctcgcccaccgcgccgcc
gcgctcgagttccaggtcaaggacaacgacaccttcggcgcgcagctcatcggcaccgtc
accgtaccggccgacctcgtcgccaggggcgaagaggtcgaagattggtaccccatcatc
ggcaccaacggcaagccgtacaagcccgacaccgcgctgcgcctccgcttccgcttccag
cccatcgccgagaacccggcataccggcacggcatccccggggaccccgaccacagcggc
attaaggactcctacttcccgctccgccacgggggccaagttacgctgtaccaggacgcg
cacgtcagggaaggggacctgccggagattgagctcgagaacggcaagatgttcgagcac
aacgcgtgctgggaggacatctgccacgccatcctagaggcgcaccacatgatatacatc
gtcggctggtcggtctacgacaaggtgcggctcgtgcgcgaggggtcgccctcgcggcca
ttgcctgagggtggcgaccttacactgggagacctgctcaagttcaagtcgcaggagggt
gtcagagtgtgcctgctcgtgtgggatgacaaaacttcacataacaagtttttcatcaag
acgggtggagttatggcaactcatgatgaagaaactcggaagtttttcaagcattcctca
gtcatatgtgttctttctcctcgatatgccagcaataagctaagcattttcaaacaacag
gttgttggaactttgtttacacaccatcaaaaatgtgtgctggttgatacacaagcatgg
ggaaacaagcggaaagttgcagctttcatcgggggcctagatctttgtgatggccgctat
gacacaccagaacacaggcttttcaaagatcttgacacagcattcgaaaatgattaccat
aaccctacattttcggcaggtgcaaagggacctagacaaccatggcatgatttacattgc
aggattgatggtcctgctgcctacgatgtcttgaaaaattttgaacagcggtggcgaaag
gcaacaaaatggcgtgaccgttttaggacagtatcccattggaaagatgatgctttaatt
aagctggagcgtatctcatggatactaagcccttcacctaatattccaaatgatcatcct
actttgtgggtttcaaaagaagaagatcctgaaaattggcatgttcaggtattccggtca
attgactctggttcactaaaaggatttcctagtgattccaaagaagcttcaaagcagaat
ctcgtgtgccggaagaacctgataattgataagagcattcatactgcatatgtccgggca
atcagatctgcacagcatttcatttatattgagaatcaatattttcttggttcttcatat
gcttggccatcctatgtgaattcaggtgctgacaatctgataccaatagaattagccctc
aaaattgcaagtaagattagagcaggagaacgctttgcagtgtatgtagtgataccaatg
tggcctgaaggagtacctactgcatcatctgtgcaagaaatccttttctttcaggcccag
acaatggagatgatgtataagataattgcagatgagcttaaggcaatggacattaaggat
ttgcaccctcaagattacttgaacttcttttgtcttggaaatcgggaagaaccaacgtca
aacggcagcctggagtcagagaaatctacagataaaagtgcagcggccttagctacaaaa
tatcggcggttcatgatctacgttcatgcaaaagggatgattgtggatgatgaatacgtc
attctgggttcggcaaacatcaaccagagatccctggcaggttccagagatactgaaatt
gcaatgggggcataccagcctcattatgcatggtctacaaagaatagacatcctcacgga
caggtatatggatacagaacgtctctctgggcagagcaccttggaatggttgatgatcgc
ttcaaggatccttcgagtttggactgtgtaaggtttgtgaatcaaatagctgaagagaac
tggcaaaggtttacagccgaagaaatgggaacactacaggggcacctcctcaagtaccca
gtcaaggtggaagctgatggtaagatcggctcactgccagaccaagaatgctttcctgac
gttggcggcaagatcctcggagctccaacttcacttcctgattcgctaaccatgtag
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