Panicum virgatum (switchgrass): 120658231
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Entry
120658231 CDS
T07260
Name
(RefSeq) disease resistance protein RPP13-like
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120658231
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Gene cluster
GFIT
Motif
Pfam:
LRR_14
NB-ARC
WH_DRP
Rx_N
LRR_R13L1-DRL21
LRR_8
AAA_14
AAA_22
AAA_16
nSTAND3
NACHT
LRR_4
ABC_tran
AAA_24
LRR_At5g56370
DUF4718
DUF6760
Motif
Other DBs
NCBI-GeneID:
120658231
NCBI-ProteinID:
XP_039792405
LinkDB
All DBs
Position
2N:55748012..55753125
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AA seq
975 aa
AA seq
DB search
MADAGVTGVVAKLGELAAAEATALLRVDAEIRVLRRKLAYLQALVRGADRQRRGRASELL
LLWLRETREVAFEVEDAVDEFHLRVEAFHLRRRRASWWGWGWHRDAVCLVQGLVTQIFVR
HGLSNQISKINERIDELNQNKETYQIESSPSEIWSSSSVEADPDWYEDKYVMGSRQDEFE
TLKNRIMNKEGNISHRAVISILGERGIGKTTLAKKLYNDPDIVKHFEVHAWVCLPPHIRF
RDYIEIIYMQVNSQIPEAPGDDDIIDKELRLLQNLQNRTYLVVLDGLISISDWNSLFDVL
PDTNGSRILLTTHLNVKEINHIDPQIAPMELPYLDMKHGEQLFCQRVFGAKEPPQIYWSK
NYYEKVHIISTGLPLAISVLAGVLRSKVIPMEWDDVFEQLESNGQPKPVRSIWSLAFDDL
PHYLKSCFLYFASVSENVILYPDRLVRLWIAEGFVVPKKAETLEDIGFDYLKELVSRGLV
QVMEKDARGCIKLVSIHNLLHSFMESEAQDSSFLEIHHHANIANPNAVRRLAIQNYVDAY
VYIPDVFPKLRSLLCDFAEDQRSSSSFGELQPHSLWGNLAELCSRACIISENVGSNTLHG
LHFLQGSRFLRVIDLNGLKMQKLPDEIGSIIHLRYLGIRNSNLEELPSSIYKLDNLQTLD
VRRTNVGKTVDEFWEIEALRHVLAEKMFLPNCSVSLKNLMTLSGVVPSDLWDEKKCPLNN
MIHLRSLSLSGISVRHTTALSAALRKMEFLAYLNLSGEVLPSNIFTTTSMRRLQVLIMYG
KLEGINDLPGDRYVLPNLTVLHLNKLELSQQFVDKFALLPCLAEMELSVVSFCETTMFFH
DGFPSLTKLKFKEVSTIQELVIGKGAMPMLSILALYDCDSLNTLKVLNGLEHLQEVAIYN
MPGIIDNIKLEDEKLFNKIKRLTTPIMVTDRGVVPGHFVRRAGIPHEQRITVASESCFSS
MEDVGPGAWIKSSSE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgggggtgacgggggtggtggcgaagctgggcgagctggcggcggcggag
gcgacggcgctgctgcgcgtcgacgccgagatccgggtgctgcgccggaagctagcctac
ctgcaggcgctcgtccgcggggccgaccgccagcgccgcggccgcgccagcgagctgctc
ctgctctggctgcgcgagaccagggaggtcgccttcgaggtcgaggacgccgtcgacgag
ttccacctccgcgtcgaggccttccacctccgccgccgccgggccagctggtggggctgg
ggctggcaccgcgacgccgtctgcctcgtccagggcctcgtcacgcagatttttgtacgt
catgggctgtcaaatcagatatctaagatcaatgaaaggatcgatgaacttaatcagaac
aaggaaacatatcaaattgaaagttctccttctgaaatttggagttcatcatcagttgaa
gccgatccagattggtacgaggataaatatgttatgggctctagacaagatgaatttgag
accctcaagaaccgtatcatgaacaaagagggaaacatttctcaccgggctgtcatctca
attttgggggagcgtggcattggaaagaccacacttgcaaaaaagttgtacaacgaccca
gatatcgtgaaacactttgaggtgcatgcatgggtatgccttcctccacatatcaggttc
agggactatatagagattatatacatgcaggtcaactcacagataccagaagctcctggt
gacgatgatatcatcgataaggaactcaggcttttgcagaaccttcagaacagaacatac
ctagttgttcttgatggtttaattagcattagcgactggaattcgttgtttgacgtgctg
ccagataccaatggcagccggatcttactcaccacacatctcaacgtgaaggaaatcaat
cacattgatccacagatagctcccatggagcttccttatcttgacatgaaacacggagaa
cagctgttttgtcaacgagtttttggtgcaaaagaacctccgcaaatttattggagcaag
aattactatgaaaaagttcacattatatcaacaggtctacctctggccatttcagtgctt
gcaggagtattacgatcaaaagttattcccatggagtgggatgatgtctttgaacaactc
gagtccaatggccagccaaaaccagttagaagcatatggtctttggcttttgacgacttg
ccacactaccttaagtcatgtttcctctactttgcatccgtgtcagaaaatgttattctt
tacccagatcgtctggtgcgtctgtggattgctgagggttttgtagtgccaaagaaggca
gaaactctggaggatattgggtttgactatctaaaagagctggtctcaagagggttagtc
caggtcatggagaaggatgctagaggatgcatcaagttggtatccatccacaatctgctc
cattcctttatggaatctgaagcacaggactctagtttccttgaaatccaccatcatgct
aatattgcaaatcccaacgcagtccggcgccttgctatacaaaactatgtggatgcatat
gtctacattcctgatgtgttccccaagctgcgctctcttctctgcgattttgcagaagac
caacgcagcagctcaagctttggagagctgcaacctcattctttatggggcaaccttgcg
gagttgtgctcgagagcctgtatcatttcagaaaatgttggctcaaacacattacatgga
ctccacttcttgcagggctccagattcctccgagtcatcgacctgaatggtcttaagatg
caaaagctgccagatgagattggaagcataatccacttgaggtaccttggcattaggaac
agcaacttggaggagctcccctcatctatttataagcttgacaatctgcagacattggac
gtaaggagaacaaatgtggggaaaactgtagatgaattttgggaaattgaagcgctacgg
catgtccttgctgagaaaatgtttttgcctaattgttcggtttccttgaaaaatttgatg
acactcagtggtgtggtgccttctgatttgtgggatgagaagaagtgccccttgaacaat
atgatccatcttcgatcactgtctttgtctggcatttcagtacgccatactaccgcactt
tcagctgctctaaggaaaatggaatttcttgcatacctaaatttatcaggtgaagtcctt
ccatctaacattttcactaccacaagcatgcgtcgtctccaggtcctcatcatgtatggt
aagcttgaaggaattaatgatttgccgggtgaccgctatgtcctaccaaacctcaccgtt
ctccatttgaataaattagaactgtcacagcaatttgtggataaatttgctctattgcca
tgccttgctgagatggagctctcagttgtttcattctgtgagacaacaatgttcttccat
gacgggttcccgagcctcacaaaactgaagtttaaagaagtttctaccatacaggaatta
gtgataggcaaaggagcaatgccaatgctttccatcttagccttgtatgattgtgatagc
ttgaatacccttaaagtcttgaatggattggaacacctccaagaagtggcaatctacaat
atgccagggattatcgataatataaagcttgaggatgagaagcttttcaacaagatcaaa
cgtttgactacccccataatggtaacagaccggggagttgttccgggtcattttgtcaga
agggcgggtataccgcatgaacaacgcatcacagtggcttctgaatcatgtttcagtagc
atggaggatgttggtcctggtgcatggattaagtcatcctcggagtag
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