Panicum virgatum (switchgrass): 120658315
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Entry
120658315 CDS
T07260
Name
(RefSeq) bromodomain-containing protein DDB_G0270170-like
KO
K22184
bromodomain-containing protein 9
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120658315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120658315
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
120658315
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Trypan_PARP
DUF7877
SPESP1
Motif
Other DBs
NCBI-GeneID:
120658315
NCBI-ProteinID:
XP_039792502
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Position
2N:complement(56115857..56122831)
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AA seq
573 aa
AA seq
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MGKQQQAPPSRRSPAMSAPPPPRRRKKKGRPSLLDLQKRSLRLEQQLQEQQQPQARRSNR
RDPGCADDEDDDGPASGSGRREKKLRLVMGLHDGSAKGEKTRKATAGREEPSDSGPTTPL
PNKKLLVFILDRLQKKDTYGVFSEPVDPEELPDYHDIIKHPMDFSTIRKKLDKGAYSNLE
QFEDDVFLISSNAMCYNSPDTIYYRQARGIQEIAKKDFENLRQDSDASEPEPEPEPEPKP
EPEPEEPKPQPRRGRPPNKNNAKQKVGRPPSEHATADFSGATLANAVNSGRHAQQEAMIA
DVLRASFANRRNEHNWSGELKTERMEGYSGYGSMWSEKMGKKPILMEDSRRSTYYESQPS
SSMYDLPVSSSYNGTKKLLVPVGVQLQQSYSRSLARFAAQLGPIGWEIASRRIERSLPPG
TKFGRGWVGDGEAPPSSFQPPVLAAFSEAMAPPNDVVASGEQPPNNSGHATEGWAASASH
LAGSQAHPMPYASTSTVQRTNSEALASQQCGSIPQIPINRGEHGVEMKGSHNNLHGHPAL
QLTVNGFNAVPGPMMFPPAAQLVVNQMQTHTAD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcagcagcaggcgccaccgtcgcggcggtccccggcgatgtcggcgcctccg
ccgccgcggcgccggaagaagaagggccgcccgtcgctgctcgacctccagaagcgcagc
ctccgcctcgagcagcagctgcaggagcagcagcagccccaggcgcgccgctccaaccgc
cgggaccccggctgcgccgacgacgaggacgatgacgggcccgcatccggctctggccgc
cgcgagaagaagctccgcctcgtcatgggcctccacgacggatcggccaagggagaaaag
actaggaaagcgacggctgggcgtgaagaaccttcagattccgggcccacaacacctttg
ccgaacaaaaagttattggtcttcatccttgataggctacagaagaaggacacttatggt
gtattctcagagcctgttgatcctgaagagttgcctgactatcatgatattatcaagcat
ccaatggatttttcgacaataaggaagaagcttgataagggggcctattccaacttggag
caatttgaggatgatgtgttcttgataagctcaaatgcgatgtgctacaattcaccagat
acaatatattatcgacaggcacgtggtattcaagaaattgctaaaaaggattttgagaat
cttaggcaagatagcgatgccagtgaaccagaaccggaaccggaaccagaaccaaagcca
gagccggaaccagaagaaccaaagccacagcctcgtaggggcagacctccaaacaagaac
aatgccaaacaaaaagttgggaggccaccatcagaacatgctactgcagacttttctggg
gcaacacttgctaatgctgtaaatagtgggcgtcatgcacagcaagaagcaatgattgca
gatgtgctgagagcttcttttgccaatcggagaaatgagcacaactggtctggcgagctg
aaaacagaaagaatggaaggttactcaggttacgggagcatgtggtccgaaaaaatggga
aagaagccaattctgatggaagatagtcgtcgaagcacatattacgagtctcaaccatcc
agttcaatgtatgatctgccggtatcgtcctcctacaatgggacgaagaagctgctagta
ccagtcggggttcagttgcagcagtcgtattcccgcagcctggcacgttttgctgcacaa
cttggccctattggctgggaaattgcatcaagacgaattgagcgaagccttcctcctgga
acaaaatttggtcgtggctgggtaggagatggtgaagcaccaccaagctcatttcagcca
cctgtactagctgcattttcagaagcaatggcaccaccaaacgatgtagtggcatcaggt
gagcaaccacctaataacagtggccatgccactgagggttgggctgccagcgcaagccat
ttggcaggatctcaggcacatcctatgccatatgcttctaccagcaccgtgcagaggacc
aattctgaagcattagcaagccagcaatgtggatccataccacaaattccaataaatcga
ggtgaacatggtgtcgagatgaagggcagccataataatcttcatggacacccagccttg
cagcttaccgtgaacggtttcaatgctgttccaggaccaatgatgttcccacctgcagca
caactggtggtgaatcagatgcagacacatactgctgattga
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