Panicum virgatum (switchgrass): 120658386
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Entry
120658386 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein 1, chloroplastic-like
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120658386
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120658386
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120658386
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Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
120658386
NCBI-ProteinID:
XP_039792594
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Position
2N:56145488..56146612
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AA seq
262 aa
AA seq
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MAASTMAISSPAMAGTPIKVGSFGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSG
EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV
KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGE
VVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
DHLADPVNNNAWAYATNFVPGN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccaccatggcgatctcctccccggcgatggccggcacccccatcaaggtg
ggctccttcggcgagggccgcatcaccatgcgcaagaccgcggccaagcccaaggtggcg
gcgtccggcagcccatggtacggccccgaccgcgtcaagtacctcggccccttctccggc
gagcccccgagctacctcaccggcgagttccccggtgactacggctgggacaccgcgggg
ctgtccgctgaccccgagaccttcgccaagaaccgcgagctggaggtcatccactcccgg
tgggccatgctcggcgcgctcggctgcgtcttccccgagctgctcgctcgcaacggcgtc
aagttcggcgaggccgtctggttcaaggccggctcccagatcttcagcgagggcggcctc
gactacctcggcaaccccagcctcatccacgcccagagcatcctcgccatctgggccgtc
caggtcgtgctcatgggcgccgtagagggctaccgcattgccggcggcccgctcggcgag
gtcgtcgacccgctctaccccggcggcagcttcgaccccctcggcctggctgacgacccc
gaggccttcgccgagctcaaggttaaggagctcaagaacggccgcctcgccatgttctcc
atgttcggattcttcgtccaggccatcgtcaccggcaagggcccgctcgagaacctcgcc
gaccacctcgccgacccggtcaacaacaacgcctgggcctacgccaccaacttcgtcccc
ggcaactaa
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