Panicum virgatum (switchgrass): 120658503
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Entry
120658503 CDS
T07260
Name
(RefSeq) formin-like protein 5
KO
K28090
formin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120658503
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
120658503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
120658503
NCBI-ProteinID:
XP_039792685
LinkDB
All DBs
Position
2N:complement(64545229..64555078)
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AA seq
1669 aa
AA seq
DB search
MALFRKFFLKKTPDRLLEISERVYVFDCCFSTDSMGEDEYRDYLSGIVAQLQEFFPDASF
MVSNFWSGDKRSRISDILSEYDMTVMDYPQQYEGCPLLQLEMIHHFLKSCENWLSVEGQH
NMLLMHCERGGWPVLAFMLAGLLLYRKTYTGEQKTLEMVYKQARRDFIQHFFPLNPQPSH
LRYLHYITRQGSGSEWPPISRPLILDSVVLHVVPRFDGEGGCRPYLRVHGQDSSPGNKSA
KVLFEMPKTKKHLLCYGQAEAPIKISASCRVQGDVVLECVHIGDNLEHKEIMFRVMFNTA
FIQSNILGLNRDDIDVSWNMNNQFPRDFRAEVLFSDPDSFKPAVATVEVADDGDETDVAS
VDTGDEFYEAEEDWHDARRDPETQSVDGRLSLDGIAALDGVEANEERSSLVKHDIDGDVK
TVISHFENPEGLQQAQQDLVKAKLNHTGGQENSDVQDIQVVATSVDSEGHKFTSICQEDT
KDVIAQTLVTTVDPTCSVEIQCQTNEPTKNLKYADLDYTAFDAPRSLSCTDGDTHSRTTT
KGGLQNGDIKIITENTVIVDNELVIYEEKTIVDNGNIIPEVKNVVNEKSGIPKIGRTTIK
SRNAHDNSCGSIKSVKPSDTADGKLDQGKLEDGLEETIPTKHTNVNDRIVVLPATEVATE
IKTKRQGPVGKQDVSIVLPQSRTEARASSPKFESDDRGQIPDKAVLSMLKKMAAGNAAQT
EQPKVAKPKTIRRWVSPKRESDATSVHRPSHPPSRYYSSPAALVIRSMSTDGKIKAVKDA
PLVSLIEPHSSHLTEESVSTQSTPSPARRSLLPGAQIASRSEAPPPPPPPSALPNSSSSS
MPMHGGSPMSSGAQKQTFAPPPPPPPPPPPPRSGIGGNTPSPPTPPPMLNNIVTTLLPPP
PPPPPPPPPPKLSSSVPPPPPPPPFTITCSSVPSPPPPPPPPPPRSMAHSAPPPPSLRSS
APLPPPLSVTRSAPPPPPPPPPPPPPPPLAATTYSRAPPPPPPLLTCSSAPPPPPPPPSR
GAPPPPPPPPSRGALPPPPPPPPPGQGAPSPPPPPPPPPPGRGAPPPPPPPPGRGAPPPP
PPPPGRGAPPPPPPPPSAHGGPPPPLGARPGPPPPPPPPGAPPPPPPLGPRPGAPPPPPS
SRPGAPPPPPPPGLRPGAPPPPPPPGGSGRAPPPPPAPGGRLGGPPPPPPPGGRASGAPA
PPRAPGVPPPPGGNPSLGRGRGAARPLGSAYGAAASRKSTLKPLHWVKVTRALQGSLWEE
LQRNGDLQSVSEFDISELESLFPAAVPKSDDSSKSERRKSLGSKPEKVHLIELRRANNTE
IMLTKVKMPLSDLVSAALALDQSTLDVDQVENLIKFCPTKEEMELLKNYNGDKDNLGKCE
QFFLELMKVPRMESKLRVFSFKIQFGSQVADLRKSLNIIDSSCNEIRSSLKLKEIMKKIL
LLGNTLNQGTARGAAVGFRLDSLLKLTDTRATNNKMTLMHYLCKVLAARSPQLLNFYVDL
VSLDAASKIQLKMLAEEMQAVSKGLEKVQLEYDASERDGPVSEIFCKKLKEFTDNAGADV
QSLSSLFSEVGKKADALIKYFGEDPVRCPFEQVISTLLTFVTTFRKAHEENLKQAELEKK
KADKEAEAEKAKSAQLTSKNDYKLSNPSRQAKQTIERTRSANRRGRDVG
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcttccgcaagttcttcctcaagaagaccccggatcggctgctcgagatctcc
gagcgcgtctacgtttttgactgctgcttctcaactgattccatgggtgaggatgagtat
cgggattacttgagcggcattgttgcgcagttgcaggaatttttcccagacgcatcattc
atggtatccaatttctggtctggggacaagaggagccggatttcagatatattatccgag
tatgacatgacagtaatggactacccacaacaatatgaaggatgtccgttgcttcagctt
gagatgattcaccatttcttgaaatcatgtgaaaattggctatcagtggaaggacagcat
aacatgctcttgatgcattgtgagagagggggatggccagttcttgcatttatgttggct
ggactccttttgtatcggaaaacatacactggcgagcagaagacactagagatggtctac
aagcaggctcgcagggactttatacagcattttttcccattaaatcctcagccttcgcat
ttgagatacttgcactatataaccaggcaaggaagtggttcagaatggcctcctattagc
cggcctcttatcctagattcagttgttctccatgttgttccgcggtttgacggcgaagga
ggttgtaggccgtatttacgtgtacatgggcaagactctagtcctggtaacaagagcgca
aaggtcctttttgaaatgccaaagacaaagaagcatcttctgtgttatggacaggcagaa
gccccgataaaaatcagtgcatcctgccgtgttcaaggagatgtggttcttgaatgcgtt
catattggcgataacctagagcataaggaaataatgttccgggtcatgttcaacactgca
ttcattcaatcaaacatccttggactgaatcgtgatgatattgatgtttcttggaatatg
aataatcagtttccaagggattttcgtgctgaggtacttttttcggaccctgattcgttc
aagcctgctgtcgccaccgtggaggtagctgatgatggggatgagactgatgttgcttcg
gtagacacgggagatgaattttacgaagcagaggaggattggcatgatgctagaagggat
ccagaaactcagtcagttgatggtagattatcgttagatggcattgcagcattggatggc
gtggaagcaaatgaagaaaggagcagcctagttaagcatgatattgatggtgatgtgaag
actgttatatcccactttgagaatccagaaggtttgcagcaggcccagcaggatctcgtt
aaggctaaattaaatcacacaggtggccaagagaacagtgatgtgcaggacatacaggtg
gttgctacatctgttgattcagagggacacaaattcacatctatctgccaggaggacacg
aaagatgtaattgcacaaactttagtaacgacagtggatccaacttgcagtgttgaaatt
caatgccagaccaacgaaccaacaaaaaatttgaaatatgctgatctggattacactgct
tttgatgcgcccagaagtttgtcatgcacagatggggatacccactctagaactacaaca
aaaggaggactgcagaatggtgatatcaagattattactgagaatactgtaatcgtagac
aatgagctagtgatctatgaagagaaaactatagttgataatggtaacattattccggaa
gtaaaaaatgttgtcaatgagaagagtggtattcctaagataggcagaacaactattaag
agtaggaatgcacatgataacagctgtggcagtattaaatctgtcaaaccttctgataca
gctgatggcaaattggatcagggaaaattagaggatggccttgaagaaaccatacctaca
aagcacaccaatgtaaatgacagaattgttgtgttaccagccactgaagtagcaactgaa
ataaaaaccaagagacagggtcctgttggcaaacaagatgttagcatagtacttcctcaa
agtcgaacagaggctagggctagcagcccgaagtttgaaagtgatgaccgagggcaaatc
cctgataaagctgtgttgtcaatgttgaagaagatggcagcaggcaatgcagcccagaca
gaacaaccaaaggttgccaagccgaaaacaatacggagatgggtttctccaaaaagggaa
tctgatgctacctctgtgcataggccatcacatccaccatccagatactatagttcacca
gctgcactggttatacgatccatgtctacagatggcaaaatcaaagctgtgaaggatgca
cctctagtatcgctgattgaaccacatagtagtcacttaacagaagagtcagtatctacg
cagtctactccatcacctgcacgacgatccttgctaccgggtgcacaaattgcatcaaga
agcgaagctccaccgcctccgcctccaccatcagctctgcccaactcctcttcaagttcc
atgcctatgcatggggggtcaccaatgtcttctggagcacaaaaacagacctttgcccct
ccccctcctcccccacccccacccccaccaccgaggtcaggcattggtggaaatactcca
tcacctccaacaccgcctccaatgctgaacaacattgtcactacgctgctgccgccgccg
ccgccgccaccaccaccaccaccaccaccaaagctaagttcaagtgtcccacccccacct
cctccacccccattcaccataacatgttcaagtgttccttctcctcctccgccgccacca
ccacctccaccacgatcaatggcacattccgctcctccaccaccatccttgcgttctagt
gctccactgccaccccctctctcagttacacgttctgctccacctcctcctccgccgccg
ccgccaccgccaccgccaccaccactagcagctacaacatattctagagctcctcctcca
ccacctcctctattgacatgttcatcagcgcctcctcctccacccccaccacctagccga
ggagcaccccctcccccacccccaccccccagccgaggagcgctccctccccctccccca
cccccaccccctggccagggagcgccttcgcccccacctccacccccacctcctccccct
ggacgaggagcacccccacctccaccccctccccctggtcgaggagcacccccacctcca
cctcctccccctggccgaggtgcacccccacccccacctcctcccccaagcgcacatgga
ggccctccaccccctctaggtgctcgccctggccctccacctcctccaccccctcctgga
gctccacctccaccacctcctctaggtccaaggccaggagctccacctcctcctccaagt
tcacgaccaggagccccacctccaccacctcctccaggtctgcgaccaggagctccacct
ccgccacccccacctggaggtagtgggagagcacccccaccacctcctgcacctggaggg
cggcttggtggccctcctcctccccctcctccaggcgggcgtgcatcaggtgcgccagct
ccacctagagcacctggtgtaccaccaccaccgggaggtaatccttccttaggcagagga
cgtggggctgcacgccctctaggatcagcatatggggctgctgcctcacgcaagtcaaca
ttgaagcctctgcattgggtcaaagtgacaagggccctgcaaggtagcctgtgggaggaa
ttacaacgcaatggtgacctacagagtgtttcagagtttgatatatcagaacttgaaagc
ctttttccggcagcagttccaaagtctgatgacagctcaaaatctgaacgtagaaaatca
cttggctcgaaaccagaaaaagttcacctgatcgagttgaggagggcaaataacacagaa
atcatgctaacaaaagtgaagatgccactctcagatttggtgagtgcagctctggcactg
gatcaatcgaccttggatgttgatcaagttgagaatctcataaagttttgtcctacgaaa
gaagaaatggaacttctcaagaattacaatggagacaaggacaaccttgggaagtgtgaa
cagttcttcttagaattaatgaaagtgccacgaatggagtcaaaactgcgagtgttctcc
ttcaagatccagtttggttcgcaagtcgcagatcttagaaaaagcttgaacatcatagat
tcttcatgcaatgagatccgaagttctctcaagttgaaagaaataatgaagaaaatcctt
ctcctcgggaatacgctgaaccagggaactgctagaggtgctgcggtaggcttccggttg
gacagtcttctaaaacttactgatacccgagcaacaaataataagatgacattaatgcac
tacctctgcaaggtacttgctgcaagatctccacagcttttaaacttctatgtcgatctt
gttagtttagatgccgcgtcaaagatacaactaaaaatgctggctgaggaaatgcaagca
gttagcaaagggctggaaaaggttcagctggagtatgatgcttcagaaagggatggtccg
gtatcagaaatattttgcaagaaactgaaagagttcacggacaatgctggagctgatgtg
cagtcgttatcttctctgttttctgaagtgggcaaaaaggctgacgcactgattaaatac
tttggtgaggatcccgttcgttgcccctttgagcaagtgatctctaccctattaactttc
gtaacaacatttcgaaaagcacatgaggagaacctcaaacaagctgagcttgagaagaaa
aaagctgacaaggaggcagaagccgagaaggccaaaagtgctcagttgactagcaaaaat
gactataaactgtcaaatccaagccggcaagctaaacaaactatagagaggacaaggtct
gcgaacagacgaggaagagacgtgggatga
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integrated database retrieval system