Panicum virgatum (switchgrass): 120658522
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Entry
120658522 CDS
T07260
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120658522
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120658522
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120658522
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120658522
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120658522
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120658522
Prokaryotic type
120658522
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
120658522
NCBI-ProteinID:
XP_039792709
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Position
2N:63888367..63892879
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AA seq
665 aa
AA seq
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MAAPSAPLLRSHPHRRALFPSSQRHRSAAAAASSLLGFPPRKPASSRRLPYTAVRSSSTA
SPSAPVEEAAAAPTGDADEQERVVLPTNESSDRLLRIRHTCAHVMAMAVQKLFPNSKVTI
GPWIDNGFYYDFDMEPLTDKDLKKIKKEMDRIIRRNLPLVREEVSREEAQKRIEALNEPY
KLEILESIKEEPITIYHIGEEWWDLCAGPHVESTGKIDRKAVELESVAGAYWRGDEKNQM
LQRIYGTAWENEDQLKAYIHFKEEAKRRDHRRLGQDLDLFSIQEDAGGGLVFWHPKGAII
RHILEDSWKHIHLQYGYDLLYTPHVAKADLWKISGHIDFYKENMYNQMDVEDEMYQLRPM
NCPYHILVYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQ
IQDEIRGVLDLTEQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATVALTNALDDKGWEY
KVDEGGGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPRRFDITYVDSNSEKKRPIMIHR
AVLGSLERFFGVLIEHYAGDFPLWLAPTQARILPVTDNELQYCNEVASELKSRGFRVEVC
HGERLPKLIRNAETQKVPLMAVVGPKEVQARTLTIRSRHNGEIGVMPVDEFITRLQLAVA
NKSSL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccctccgcccccttgctccgctcccacccccaccgccgagcgctcttcccc
tcatctcagcgccaccgttccgcggcagcggccgcctcctccctgcttgggttccctccc
cgcaaacccgcctcctcccgcaggctcccctacaccgcggtgcggtcctcctccaccgcc
tcaccctcggcaccggtagaagaggcggcagcggccccgacaggcgatgcggacgagcag
gaacgggtggtgctccccaccaacgagtcctctgaccgcctgctgcgcatccggcacacc
tgcgcccatgtgatggccatggctgtccagaagctgttccccaactccaaggtgaccata
ggtccctggatagacaatggattctactatgacttcgacatggagccattgacggataaa
gacctaaagaagatcaagaaggagatggatcggatcatccgacgaaatctcccattggtg
agggaggaagtgtcccgggaagaagctcagaagaggattgaagcactcaacgagccctac
aagttggagattttggagagcattaaggaagaacctatcacaatatatcatattggagaa
gagtggtgggatctctgtgccgggcctcatgtggagtctactggaaaaatagacagaaag
gctgttgagcttgagtctgttgctggtgcttactggagaggtgatgagaaaaaccaaatg
ctacaaagaatatatgggactgcatgggagaatgaagatcagttgaaggcttacatccac
tttaaggaggaggccaagcgccgagatcatcggcgactgggtcaggaccttgatttgttc
tctatacaggaagatgctggtggtggtttagtattttggcatccaaaaggcgctatcatc
aggcacattttagaagactcatggaaacatattcatttgcaatatggttatgatctgctg
tacactcctcatgttgcaaaggccgatctttggaaaatcagtggacatatagatttctat
aaagagaatatgtacaaccaaatggatgttgaagatgagatgtatcaactgcggccaatg
aattgtccttaccacattttggtatacaagagaaaactacattcatacagggattttccc
atcagagtggcagagctaggaactgtctatagatatgagctatctggtagtctgcacggg
ttattccgtgtaagagggtttacacaggatgatgcgcacatattttgtctggaggaccag
atacaagatgaaatcagaggtgttcttgatctaactgagcaaatactaggacaatttggc
tttagatattatgagataaatctttcaaccaggccagagaaatctgttggcagtgatgac
atatgggaaaaagcaacagttgctctgacgaacgcgttagatgataaaggctgggaatac
aaagttgatgaaggtggaggtgccttttatggtccaaaaattgatctaaaaattgaggac
gctcttggaaggaaatggcagtgttccactgtgcaggttgatttcaatctgcctcgacgg
tttgacattacttatgtcgattcaaatagtgagaaaaagcgacctatcatgattcataga
gctgtccttgggtctttggaacgcttctttggtgtcctgattgaacactacgctggtgat
tttccactttggcttgcaccaactcaagcacgtattctacctgtgacagacaatgagttg
caatactgtaatgaggtggcctcagaactgaaatcaagagggttccgtgttgaagtttgt
catggagagcgcctaccgaagctaataaggaatgctgaaacacagaaggtgccactcatg
gcagttgttggtcctaaagaagttcaggccaggaccctaactattaggtccaggcacaat
ggggagatcggtgtgatgcctgtcgatgaattcatcaccagacttcagcttgctgtcgcg
aacaaatcttcgttataa
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