Panicum virgatum (switchgrass): 120658533
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Entry
120658533 CDS
T07260
Name
(RefSeq) protein SHORT-ROOT 1
KO
K27743
protein SHORT-ROOT
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120658533
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120658533
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120658533
NCBI-ProteinID:
XP_039792724
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Position
2N:63958329..63962722
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AA seq
583 aa
AA seq
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MDTLFRLVSLQASEQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYYHSNSSGGGGQYYY
GQQHQQYYLEPYQQEECGNAHHLYMDEDFSSSSSSRQHFHSHGAAVQPPTSSVATAPTPP
LSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAALGGGGGGRWASQLL
LECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLANYFLPGLFARLTASGPRTLRTLA
AASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASSEPQRFHILDLS
NTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLM
GVPFSFRAVHHAGDLAELDLDALDLRDGGATTAVAVNCVNSLRGVVPGGARRRDAFTSSL
RRLDPRVVTVVEEEADLVASDPGASEEQDGDTEAAFLKVFGEGLRFFSAYMDSLEESFPK
TSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVR
SLLRRYREGWSMRDACLDDSAPGAGVFLAWKEQPLVWASAWRP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctgtttaggttggttagcctccaagcctccgagcagcagcagcagtcggcg
tcctacaactcgaggagcaccacgtcgagcggctccaggtcgtcgtcgcaccagaccaac
gcctcctacaactactactaccacagcaacagcagcggcggcggcgggcagtactactac
ggccagcagcaccagcagtactacctggagccgtaccagcaagaagaatgcggcaacgcc
caccacctttacatggatgaagacttctcatcgtcgtcctcgtcgaggcagcacttccac
tcgcacggtgcggcggtgcagccgccgacgtcgtccgtggccacggcgccgacgcccccg
ctgtccacgtcgtccacggccgcgggggcggcgcacgcgttgttcgaggcggcggacctg
tcgttcccgcccgacctcaacctcgacttctcgtccccggcgtcgtcctccggcgggggc
gcggcgtcgtcggcggcgctcgggggtggtggcggcgggaggtgggcgagccagctgctg
ctggagtgcgcccgggcggtggcggcgcgggacagccagcgcgtgcagcagctgatgtgg
atgctcaacgagctggcgtcgccgtacggggacgtcgagcagaagctggccaactacttc
ctcccggggctcttcgcgcggctcacggcgtccgggccgcggacgctgcgcacgctcgcg
gcggcgtccgaccggaacacgtcgttcgactccacgcggcgcacggcgctgcggttccag
gagctcagcccgtggtcgtccttcgggcacgtggccgccaacggcgccatcctggagtcg
ttcctggaggccgccgcggcgtcgtcggagccgcagcggttccacatcctcgacctcagc
aacacgttctgcacgcagtggccgacgctgctcgaggcgctcgccacgcgatccgccgac
gacacgccgcacctgtccatcaccaccgtggtgtcggccgcgccgtccgcgccgacggcc
gccgtgcagcgcgtgatgcgggagatcggccagcggatggagaagttcgcgcggctcatg
ggcgtgcccttcagcttccgcgccgtgcaccacgccggggacctcgcggagctcgacctc
gacgcgctcgacctgcgcgacggcggcgccaccaccgcggtcgccgtcaactgcgtcaac
tcgctgcgcggcgtggtgccgggcggtgcccgccggagagacgcgttcacctcgtccctc
cggcgcctcgacccgcgggtcgtcaccgtcgtcgaggaggaggccgatctcgtggcttcc
gaccctggcgcatccgaggaacaagacggcgacacggaggcggccttcttgaaggtgttc
ggcgagggcttgcggttcttctcggcttacatggactctctggaggagagcttccccaag
acaagcaacgagcggctggcattggagaggggagccggacgtgccatcgtggacctggtc
tcgtgcccggcgtcggagtccatggagcggcgggagacggcggcgtcatgggcacgccgc
atgcggtcggccgggttctctccggtggcattcagcgaggacgtcgccgacgacgtgcgg
tcactgctccgccggtaccgggagggttggtcgatgcgggacgcctgtttagacgactcg
gcacccggagcaggtgtcttcctcgcgtggaaggagcagcctctcgtgtgggcaagcgcg
tggaggccatga
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