KEGG   Panicum virgatum (switchgrass): 120658672
Entry
120658672         CDS       T07260                                 
Name
(RefSeq) protein RBL-like
  KO
K14961  COMPASS component SWD1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120658672
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     120658672
    COMPASS/SET1 complex (yeast)
     120658672
    MLL-HCF complex
     120658672
    MLL3/MLL4 complex
     120658672
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 WDR55 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Cytochrom_D1 Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 120658672
NCBI-ProteinID: XP_039792855
LinkDB
Position
2N:complement(1805882..1808858)
AA seq 550 aa
MIEEYLQHGAMKCIAFNRTGTLLAAGCSNGSCVIWDFETKGLAREFRDKDFTASITSVSW
SKYGHRLLASATDKSLTLWDVSSGKKITRIILQKAPLRASLQPGSPIPSICLACPLSSAP
LLVDLDTGSTTFLPVSVSGNSNPPAANARNKVVDGTPPFTPTAAAFDKHGDLVYVGNTKG
EILIVDSKSIQVHAVIPIPGGAVVKDILFSRDGQYLMTNSNDRVIRVYKNILPVKGSGEA
IRNMSNNSNDYESHYDNLKVNGTCCLILSSELSDSITRTHWRTPCFSGNGLWVVGASANK
GEHKLQIWDQAGPLVKILEGPKEAVIDLAWHPAEPTIATVSVTGFVYIWAKEHVENWSAF
APDFEELEENEEYVEREDEFDLNPREEEDEEVAIDEDSDVDIETFEKDARFSDVEDSVDE
ILFLPAIPSPDVPDEQPEKCLGSSSKLVDSNHSGSPSSMDAVQGGQATLVSSPMEVNNSV
ADEPAEGPVSKRMRRLSVGGLELQQPEKGKTPATKDKSTKSSAQQKEPANEDNSTFDDEA
TEDGDVNIDT
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgattgaggagtacttgcagcatggtgctatgaaatgtatcgcatttaaccgtactggg
acgcttcttgctgctggatgctcaaatggtagctgtgttatctgggactttgaaacaaaa
gggcttgcaagagaatttcgtgataaagatttcactgcgtctataacaagtgtctcctgg
tccaagtatggccaccgtttacttgcgtctgctactgacaagtcattgacactttgggac
gtgtcttctgggaaaaagattacccgaataattcttcagaaggctccattgcgtgccagt
cttcaacctggttctccaatcccatctatttgtttggcatgccctctgtcttctgcacct
cttcttgttgatttggataccggaagtaccacatttctccctgtttctgtatctggaaat
agtaacccccctgcagctaatgcccgcaataaagttgtggatggtaccccaccttttaca
ccaacagctgctgcatttgataagcatggggatctggtatatgtgggcaacaccaaggga
gaaattttaatcgttgattcaaaaagcatccaggtacatgcagtaattcccatccctggt
ggagctgtggttaaggatattcttttcagccgggatggtcaatatctgatgacaaattct
aatgatcgggtcattagagtctacaagaatattctgcctgttaaaggttctggagaggcg
attagaaacatgagcaacaacagtaatgactatgaaagtcactatgataatttaaaagta
aatggcacatgctgccttattctttcctctgaactttcggattccatcacaaggacacat
tggaggacaccatgtttcagtggtaatggtctgtgggtagttggtgcttctgcaaacaaa
ggtgagcacaagttgcaaatatgggaccaagcagggccccttgtaaagatccttgaaggt
ccaaaggaagccgtcatcgatcttgcctggcatcctgctgaacctacaattgctacagta
tctgtaacaggctttgtatacatttgggctaaggagcatgtagagaactggagtgcgttt
gctcctgattttgaagaattagaagaaaatgaagagtacgttgaacgagaggatgagttt
gacctgaacccacgtgaagaagaggatgaggaagtggcgatagatgaggattctgatgtt
gatattgagacatttgagaaggatgcaaggttcagtgatgtggaggattctgtggatgag
attctcttcttaccagcaattccttccccagatgttcctgatgagcagccagagaaatgc
cttggaagctcatcaaagttggtggatagcaaccattctggttctccatcctcaatggat
gctgtacagggtggtcaagctactctagtgtcaagcccaatggaagtgaacaactctgtt
gctgacgaacctgcggaagggccagtctcaaagaggatgcgccggctgtccgttgggggg
cttgagttgcagcagcctgagaagggcaaaacgcccgcaacaaaggacaagtccacaaaa
tccagcgcccagcagaaggaacctgccaatgaggacaactccacctttgatgatgaagca
actgaggacggcgatgttaacatcgatacctag

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