KEGG   Panicum virgatum (switchgrass): 120659004
Entry
120659004         CDS       T07260                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120659004
   04120 Ubiquitin mediated proteolysis
    120659004
  09126 Chromosome
   03083 Polycomb repressive complex
    120659004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120659004
   04121 Ubiquitin system [BR:pvir04121]
    120659004
   03036 Chromosome and associated proteins [BR:pvir03036]
    120659004
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    120659004
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     120659004
   Cul7 complex
     120659004
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120659004
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     120659004
SSDB
Motif
Pfam: Skp1 Period_C
Other DBs
NCBI-GeneID: 120659004
NCBI-ProteinID: XP_039793023
LinkDB
Position
2N:66168613..66169401
AA seq 131 aa
MIADGCIKLEKIGSETPDPEKLVDYCNKHANSIPSAASSSSSLLTAPSKELEDWDRKLVD
CLSQDALFSLAEASDSLIMDGLLDLTCREIDDLMKGKTIDEMRKMFNIKNDFTKEQEEEI
RRKHAWAFGDA
NT seq 396 nt   +upstreamnt  +downstreamnt
atgatcgccgacggctgcatcaagctcgagaagatcgggtccgagacccccgaccccgag
aagctggtggactactgcaacaagcacgccaactccatccccagcgccgcgtccagcagc
agcagcctcctcaccgcgccatccaaggagctggaggattgggaccgcaagctcgtcgat
tgcctcagccaggacgccctcttcagcctcgccgaggcctccgactccctcatcatggac
gggctcctcgacctcacctgccgcgagatcgacgacctgatgaagggcaagaccatcgat
gagatgcgcaagatgttcaacatcaagaatgacttcacaaaggagcaggaggaggagatt
cgccggaagcacgcctgggccttcggcgacgcctag

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