Panicum virgatum (switchgrass): 120659052
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Entry
120659052 CDS
T07260
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 21
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120659052
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120659052
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Motif
Pfam:
Pectinesterase
PMEI
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120659052
NCBI-ProteinID:
XP_039793057
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Position
2N:69766479..69768726
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AA seq
568 aa
AA seq
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MSKGAIIGASTVLVVAVVAAVCVVSFKGNSSKGEGEGDGNLSMSVKSVKAFCQPTDYQQT
CEAELSKAAGNATSPTELAKAIFAVTSDKIHKAISESATLNELKNDKRTSGALQNCKELL
EYAIDDLKATFDKLGGFEMTNFKKAVDDLKTWLSAALTYQDTCLDGFANATTTEASAKMQ
SALNASQELTEDILAVVDQFSDTLGGLSVGRRLLGEDGMPAWMPAEGGSRRLLEEASPAS
PDFKPNVTVAADGSGDVKTIKEALDRVPPKNAAMYVVYVKAGTYKEYVSVGRPQTNVAFI
GDGADKTIITGNKNFKMNLTTKDTATMEAIGNGFFMKGVRVENTAGAENHQAVALRVQSD
QAVFYQCTFDGYQDTLYTHAQRQFFRDCTVTGTIDFIFGNSQVVIQNCLIQPRKPMANQA
NIITAQGRRDKRSVGGTVLHNCTIEPHPDFKAEAGGKIATYLARPWKEYSRTLYIQNDIG
GFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMSKRARWGGIKTVTYAEAQKEFTVEVF
IQGQNFIPKFGVPYIPGLLPQAQQGRTH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaggtgctatcatcggcgcgtcgaccgtcctggtggtggccgtggtggccgcc
gtgtgcgtggtgtccttcaagggcaactcgagcaagggcgagggcgagggcgatggcaac
ctctccatgtccgtcaagtcggtgaaggccttctgccagcccaccgactaccagcagacc
tgcgaggcggagctgagcaaggccgccggcaacgccacctcccccaccgagctggccaag
gccatcttcgccgtgacctcggacaagatccacaaggccatcagcgagtcggccaccctg
aacgagctcaagaacgacaagcgcacctcgggcgcgctccagaactgcaaggagctgctc
gagtacgccatcgacgacctcaaggccaccttcgacaagctcggcggcttcgagatgacc
aacttcaagaaggccgtggacgacctcaagacctggctgtcggcggcgctcacctaccag
gacacctgcctggacggcttcgcgaacgccaccaccacggaggcctcggccaagatgcag
agcgcgctgaacgcgtcgcaggagctgaccgaggacatcctggccgtggtggaccagttc
tccgacacgctggggggcctcagcgtggggaggcggctgctgggcgaggacggcatgccg
gcctggatgccggccgagggcggcagcaggcggcttctggaagaggcgtcgccggcgtcc
cctgacttcaagcccaacgtgacggtggcggcggacggcagcggcgacgtcaagaccatc
aaggaggcgctggacagggtgccgcccaagaacgcggccatgtacgtggtgtacgtcaag
gccgggacgtacaaggagtacgtctccgtggggcggccgcagacgaacgtggccttcatc
ggcgacggcgcggacaagaccatcatcacggggaacaagaacttcaagatgaacctgacg
accaaggacacggcgaccatggaggcgatcgggaacggcttcttcatgaagggcgtgcgg
gtggagaacacggcgggggcggagaaccaccaggcggtggcgctgcgggtgcagagcgac
caggcggtgttctaccagtgcaccttcgacgggtaccaggacacgctctacacgcacgcg
cagcggcagttcttccgggactgcacggtcacggggaccatcgacttcatattcggaaac
tcgcaggtggtgatccagaactgcctcatccagccccgcaagcctatggcgaaccaggcc
aacatcatcacggcgcaggggcggcgcgacaagcgctcggtgggcggcaccgtgctgcac
aactgcaccatcgagccgcacccggacttcaaggcggaggccggcggcaagatcgcgacg
tacctggcgcggccctggaaggagtactcgcgcacgctctacatccagaacgacatcggc
ggcttcatcgaccccaagggctggctcgagtggaacggcgacttcggcctcgagacgctc
ttctacgcggaggtggacaaccgcggcgccggcgccgacatgagcaagcgcgccaggtgg
ggcggcatcaagaccgtcacctacgccgaggcgcagaaggagttcacggtcgaggtcttc
atccagggccagaacttcatccccaagttcggggtgccctacataccgggattgctgccg
caggcgcagcaaggaaggacgcactga
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