Panicum virgatum (switchgrass): 120659120
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Entry
120659120 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120659120
KO
K09338
homeobox-leucine zipper protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120659120
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
120659120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
ZPR
bZIP_1
KxDL
HALZ
CCPG1_N
Motif
Other DBs
NCBI-GeneID:
120659120
NCBI-ProteinID:
XP_039793112
LinkDB
All DBs
Position
2K:298811..308237
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AA seq
574 aa
AA seq
DB search
MNVTCAPGPDGFGLSFYKAAWPSVESRLMSFLEAFYNLDVELERVNRSYVVLIPKMPAAV
TVGAFRPICLQNCDIKVTSQDQGVKHPIEANMPCPALILVSADVDSINFHKSTVVPMHVE
AETLQTCVDILGCREEQFPQSYLGLPLSHEKLRLSTFVPMISKADKYLAGWKAALLNTMG
RAVLADSVLGNLLIYAMGALELPKGTVAALEQKRRTFVWTGEDKASGAQCLVAWEQHLEA
HPQGEPDPTPPFSLGPALPASRVGAALPWASASASASRAAPPSRRPPAPPPSVQAAPPSI
ASPDLLRLLLAAVPSPPNRRLPDLLRAAAPSPALVDASRCRDKQRKESSRLQAVNRKLTA
MNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLTNDTSCQSHVTTPANLRDASNPSGL
LSIAEETLTEFLSKATGTAIDWVQMPGMKIVEILKDRPSWFRDCRGLEVFTMLRAGNGGT
IELVSMQMYAPTTLVPARDFWTLRYTTTLEDGSLVVYERSLSGSGGGESTATAQQFPVHR
VLLLLLLACHETCKCSFCFCLHEFLKNFILLCDG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacatgcgcgccggggcccgatggcttcggtctgagcttctacaaagcagcc
tggccgtccgtcgagtcgcgcctcatgtccttcctcgaggcgttctacaacctggatgtg
gagctggagcgggtcaatcgctcctacgtggtgctgatccccaagatgccagcagcggtg
accgtgggcgcgttccggccaatttgtctgcaaaactgcgacatcaaggtgacgtctcaa
gaccaaggggtgaagcatccgattgaggccaacatgccgtgcccggccttaatcttggtc
agtgcagatgttgactcgattaactttcacaaaagcacggtggtgccgatgcatgtagag
gctgaaacactgcagacatgtgtggacattttgggatgccgggaggaacaatttccacaa
tcctatcttggactgccactatcccatgagaagttacgactgtccacctttgtcccaatg
atcagcaaggcggacaagtatctcgcaggatggaaggcagctctactcaacacaatgggc
cgagctgttttagcagactcggtgcttggcaacctactgatctacgccatgggcgccctg
gaactcccaaaaggaactgtggccgcattagagcagaagagaagaacctttgtctggaca
ggggaggacaaggcctcgggagcccaatgcttagttgcctgggagcagcatttggaagcc
cacccgcagggggagcccgacccgaccccgccgttttccctggggccggcgctccccgcc
tcccgagtcggggcggcgcttccctgggcctccgcctccgcctccgcctcccgagccgcg
ccgccgtcacgccgcccgcccgcccctccgccttccgtccaggccgcgccgccctccatc
gcctccccggatctcctccgtctcctcctagccgccgtgccgtcacctccgaaccgccgc
ctcccggatctcctccgagccgccgcgccgtcaccagccctcgtcgacgcgtcaagatgc
cgtgataagcagcgcaaggagtcttccaggctccaggccgtgaacagaaagttgactgcg
atgaacaagcttctcatggaggagaatgagcgtctgcagaagcaggtctcccagctggtt
cacgagaatgcgtacatgaagcagcagctgcagaatccttcattaacaaatgacacgagc
tgtcaatcacatgtgaccactcctgccaacctaagagatgcaagtaatccatcagggctc
ctctcaatagctgaggagaccttgacagagttcctctcaaaggctacaggaactgctatt
gattgggtccagatgcctgggatgaagattgtggagatcttgaaagaccgtccaagttgg
tttcgtgattgtcggggtcttgaagtctttacaatgttacgagctggaaatggtgggacc
attgagcttgtttccatgcagatgtatgctcctactactttagttcctgcaagagatttt
tggacactgagatacacaaccaccctggaggatggcagtcttgtggtctatgagagatct
ttgagtggttcagggggtggtgaaagtactgccacggcacaacaatttcctgttcaccgt
gtgcttctacttctgctgttagcctgccacgagacatgcaagtgcagcttctgcttctgt
cttcatgaatttctcaagaattttatcctgttgtgtgatggatga
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