Panicum virgatum (switchgrass): 120659126
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Entry
120659126 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120659126
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120659126
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GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
BTB_2
TPR_Nup160_C
Motif
Other DBs
NCBI-GeneID:
120659126
NCBI-ProteinID:
XP_039793115
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Position
2N:complement(2878009..2879152)
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AA seq
330 aa
AA seq
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MSLYLLMDEDEGGGGAAAAAAAGDDVHVVFILMMCDVGGGARYLTSGKVAAAIGRKGDAC
SYERFVSREHFVEFFKSGDRFAIRCECDLTVFPAGSRPELGASRRGVVVMLSSHSSPSGE
KAPPPTPAPEGADVEFEVGGKIFAAHKSVLAARSAVFKEEFFGPTKEKDTSYVRISDMHP
ESFEALLHFMYTDSLPEMTMNSLKDGPVLAEDLLIAAGRYNLKDLKSLTENKLCSHVGVS
TVLLMLAIAEQYQCCKLKKMCLGFIGSRANAWAIMATNDIENLARSSPSAVKDVIVEILN
TRMARSKRLIKAFIFACCFQMLLLVFIWYS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctacctcctaatggacgaagatgaaggaggcggcggggcagccgccgccgcc
gcagccggggacgacgtccacgtggtgttcattttgatgatgtgcgacgtgggaggcggg
gcgcggtatctcacgtccggcaaggtcgccgccgccatcggccggaagggggacgcgtgc
agctacgagcgcttcgtctcgcgcgagcacttcgtggagtttttcaagagcggcgatcgc
ttcgcgatccgatgcgaatgcgacctcaccgtttttccggcgggcagtcggccagagctc
ggagctagccgccgaggtgttgtcgtcatgctctctagccactcgagtccatccggcgag
aaggcgccgccgccaacgcctgccccggaaggggcagacgtggagttcgaggtcggcggc
aagattttcgccgcgcacaagtccgtgctcgccgcccggtcggcagttttcaaggaggag
ttcttcggcccgacaaaggagaaggacaccagctacgtgcgcatcagcgacatgcacccg
gagtcgttcgaggccctcctgcatttcatgtacaccgactcgttgccggagatgaccatg
aattcactaaaagatgggcccgtgctcgccgaggatctcctcatcgccgccggccggtac
aacctgaaggatctcaagtcactgacggagaacaagctgtgcagccatgtcggcgtgagc
acggtcctgctgatgctggcaatagcggagcaataccagtgctgcaagcttaagaagatg
tgcctagggttcatcggttctagagccaatgcgtgggcgatcatggcgacgaacgacatt
gagaatctggcaagaagcagtccctccgccgtgaaggatgtgatcgttgagattttgaac
acaaggatggcgaggagcaagcgtctcatcaaagctttcatttttgcttgctgtttccag
atgctccttttggtgtttatttggtattcttaa
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