Panicum virgatum (switchgrass): 120659144
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Entry
120659144 CDS
T07260
Name
(RefSeq) BTB and MATH domain-containing protein 43-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120659144
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120659144
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
Motif
Other DBs
NCBI-GeneID:
120659144
NCBI-ProteinID:
XP_039793127
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Position
2N:3327998..3328606
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AA seq
202 aa
AA seq
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MSPLYAPLAAGAEDDNLIRTLLPEEVTVSSIVARAVGTGHHMLKVEGYSRLKHTRGDNGS
PLLSGEFRAGGQTWKIRWYLDGAHKEDAGFVSLYLSLVDPGTSAAVHAEVKFELVDQWPL
LPLWCRHRKRLQVSPFQPGKSWGFPRFIGAGALEGGGSRFLKGDCFAVRCKVTVVEEQGA
MEEEVQAEDMERMGVVCLCKDG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgttgtacgcgcccctagctgccggtgccgaggacgacaacctgatccgcacg
ttgctcccagaggaggtgaccgtgtccagcatcgtcgcgagagcggtcggcaccgggcac
cacatgctcaaggtggagggctactcgcggctcaagcacacgcgcggcgacaacggcagc
cccctcctgtccggtgagttcagggccggcggccagacctggaagatccgctggtacctg
gacggggcgcacaaggaggacgccggcttcgtctcgctgtacctgtccctcgtcgacccc
gggacgagcgccgccgtccatgccgaggtcaagttcgagctggtcgaccaatggccgctg
ctgccgctctggtgccggcaccggaagcgcttgcaggtttcccccttccagccgggcaag
tcctggggcttccccaggttcatcggcgccggtgccctcgaaggcggcggctccaggttc
ctgaagggcgactgcttcgccgtccggtgcaaggtcaccgtcgtcgaggagcagggcgcc
atggaggaggaggtgcaggcggaggacatggagaggatgggtgtggtgtgcctgtgcaag
gacggctag
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