Panicum virgatum (switchgrass): 120659162
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Entry
120659162 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP5-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120659162
04141 Protein processing in endoplasmic reticulum
120659162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120659162
04131 Membrane trafficking [BR:
pvir04131
]
120659162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120659162
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120659162
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120659162
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120659162
Autophagy
ER-phagy
ER stress-related proteins
120659162
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120659162
Exosomal proteins of other body fluids (saliva and urine)
120659162
Exosomal proteins of colorectal cancer cells
120659162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
FMO-like
Amino_oxidase
DAO
NAD_binding_8
Pyr_redox_2
Pyr_redox_3
MreB_Mbl
FAD_binding_2
FAD_oxidored
Thi4
FAD_binding_3
NAD_binding_9
HI0933_like
NAD_binding_7
AlaDh_PNT_C
Pyr_redox
GIDA
MurD-like_N
TrkA_N
KARI_N
NAD_binding_2
Shikimate_DH
ApbA
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
120659162
NCBI-ProteinID:
XP_039793144
LinkDB
All DBs
Position
2K:complement(512523..517944)
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AA seq
593 aa
AA seq
DB search
MVVSSNSKKVCVVGAGVAGLAAARELLQEGHDVTVMEQSAGVGGQWLYDPATDAGDPLGT
AGAHSSIYASLRLNTPREVVGFSGFPFYPKDNGGGDARRYPGHGEFLRYIRDFCDAFGFM
DAVRLSTRVLHVGPAPRDGGIVLRWVVRCVKQGDCGEVVTTTEEVFDAVVVAVGQYTQPR
LPTINLHLHPEIDCLCEDGRVVFSDGFVVVADAIIYCSGLWLLALAALGKAGALFLDLEW
PPDPATYYPPGRVIAVDLGNTNSCVAGYGGGGQTQTMFQLCIPSWVAFADDGAVLVGEDA
RNHAAVNPQAAISGFKRLLGKRLTRVFEREFAERVKENLPYKIDVDKDVWPHIQVTTSDG
AVRLLGVEKLTAMVVAKLKETAEAYLGHRVEAAILTLPQAFSDYASRDAAFFAGRLAGLE
AMRVLSEPAAAANAYAVDEHLREEGNVVVLHVGGGTAEASVLTLVDGAYEALGLEYDPFF
GGQDLDRRIVDHFVGLVRNKHGKDISNDGAAMDKLRTACERAKKTLSHQDDARVTVESLV
DGVDLAEPLTRAEFEELNHDLFLKVVELVDKAVSQARDYYMDSDELVIDEVVL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgtcgtccaactccaagaaggtgtgcgtggtcggcgccggcgttgcggggttg
gcagctgcccgcgagctgctccaagagggccacgacgtgacggtcatggagcagagcgcc
ggcgtcggcgggcagtggctgtacgaccccgcgaccgacgccggcgaccccctcggcacg
gccggcgcgcacagcagcatctacgcctccctccggctcaacacccccagggaggtcgtc
ggcttctcgggcttccccttctatcccaaggacaacggcggcggcgatgcccggcgctac
ccgggacacggcgagttcctgaggtacatcagggacttctgcgacgcgttcgggttcatg
gacgccgtcagactcagcaccagggtcctgcacgtcggcccggcgccgcgcgacggcggc
atcgtcctgcggtgggtggtgaggtgcgtcaagcaaggtgattgtggcgaggtggtaacg
acgacggaggaggtgttcgacgccgtcgtcgtcgccgtcggccagtacacgcagccaagg
ctcccgaccatcaaccttcacctgcaccccgagatcgattgcttgtgcgaggacgggcgg
gtggtcttctccgacggcttcgtcgtcgtcgccgacgccatcatctactgctcgggactc
tggctcctggcacttgcagcgctcggcaaggcaggtgcgctgttcctcgacctggagtgg
cctcccgatccggcgacgtattacccgccggggagagtcatcgccgtcgacctcggcaac
accaactcctgcgtcgccggctacgggggcggcggccaaacccagaccatgttccagctc
tgcatcccatcctgggtcgccttcgccgacgacggcgccgtcctcgtcggcgaggacgcc
aggaaccacgccgccgtcaatccccaagccgccatctccggcttcaagcgcctcctcggc
aaaagattgacacgcgtttttgagcgggagttcgctgagagagtcaaggagaatctgccg
tacaagattgatgtggacaaggacgtgtggcctcacatccaggtgacgacttcggacggc
gcggtcaggctcttgggcgtcgagaagctcacggccatggtggtcgccaagctcaaggag
acggcggaggcgtacctcggccaccgcgtcgaggccgccatcctcaccctcccgcaggcg
ttcagcgactacgcgtccagggacgcggcgttcttcgccgggaggcttgccggcttggag
gccatgagagtgctcagcgagcccgccgcggcagccaacgcctacgccgtcgacgagcat
ctgcgcgaggagggcaacgtcgtcgtcctgcacgtcggcggcggcacggccgaggcgagc
gtcctgacgctcgtcgacggcgcgtacgaggccctgggactggaatacgacccgttcttc
ggagggcaggacttggaccggaggatcgtggaccacttcgtcgggctcgtcaggaacaag
cacggaaaggacatcagcaacgacggcgccgccatggataagctgaggacggcgtgcgag
cgtgccaagaagacactgagccaccaggacgacgcccgggtcaccgtcgaatcgctcgtc
gacggcgtggatctggcggagccgctgacccgggccgagtttgaggagctgaaccatgat
ctgttcctcaaagttgtggagctggtggataaggcggtgtcgcaagctcgagattattac
atggacagtgatgagctggtgatcgatgaggttgttctatga
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