Panicum virgatum (switchgrass): 120659170
Help
Entry
120659170 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 3-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120659170
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120659170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BACK_BPM_SPOP
BTB
TRAF-mep_MATH
BACK
Motif
Other DBs
NCBI-GeneID:
120659170
NCBI-ProteinID:
XP_039793152
LinkDB
All DBs
Position
2N:complement(54864..62695)
Genome browser
AA seq
402 aa
AA seq
DB search
MAVPSQTPLQPPSWSRSVTETVRGSHQFTVRGFSLAKGMGPGRYLASDIFAVGGYHWAVY
LYPDGKNPEDNANYVSVFVALASDGADVRALFELTLLDQSGRARHKVHSHFDRALQAGPY
TLKYRGSMWGYKRFYRRSLLETTDFLKNDCLVMNCTVGVVKNRIETPKNIQFHVPPSDMG
RCFKELLSLGIGCDITFEVGDEKVRAHKWILAARSPVFKAQFFGPIGKPDLRRVVVEDVE
PVVFKAMVNFIYADELPSIHELAGSVSMSTSTVVVQHLLAAADRYGLDRLRILCEAKLCD
ELTPETVATTLALAEQHHCAELKSSCLKFAAVRENLGAVMETEGFNYLEETCPSLLSDLL
ATVAVVDDDPASVNRKRGVCGNEGAAPVESFEGSERRTRRRV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggttccgtcgcagacgcctctccagccgccctcgtggtcgcgctccgtcaccgag
acggtgcggggctcgcaccagttcaccgtcaggggcttctccctcgccaagggcatgggc
cccggccgctacctcgcaagcgacatcttcgccgtcggaggataccactgggccgtctac
ctctacccggacggcaagaaccccgaggacaacgccaactacgtctccgtcttcgtcgcg
ctcgcctccgacggcgccgacgtccgcgccctcttcgagctcaccctcctcgaccagtca
ggccgcgcccgccacaaggtccactcccatttcgaccgcgcgctccaggccggaccctac
acgctcaagtacaggggatccatgtggggttacaagcgattctacagaagatcactcttg
gaaacaaccgacttcttaaagaatgattgcctagtgatgaactgcactgtgggtgttgtc
aagaaccgtatagaaacaccaaagaacatccagtttcatgttcccccatcggacatgggc
cgctgcttcaaggagttgctcagcctcggcattggatgtgacataacctttgaagtgggt
gacgagaaagtcagagcacataagtggattcttgctgctcgctccccggtgttcaaagcc
cagttctttggtcctattggaaagcctgacctacgcagagttgtcgtggaggatgtggag
cctgttgtcttcaaggcaatggtgaacttcatatatgctgatgaactccctagcattcat
gaactagctggatctgtctcgatgtcgacatcgacagtagtggtgcagcatttattggcg
gcagctgatagatatggattagaccggctgcgtatcctgtgtgaagcgaagttatgtgat
gaactgactcctgaaacagttgcgacaaccttagccctagctgaacagcaccattgtgct
gagctgaagtcctcctgtctaaagtttgctgctgttcgagaaaatttgggagctgttatg
gagacagaaggttttaattacttggaggagacatgcccgtcccttctatctgacttgtta
gctactgtggcagttgtggacgatgatcctgcatctgttaaccgaaagagaggggtttgt
gggaacgaaggcgcggccccagtcgaaagttttgagggtagtgaaaggcgcacccggagg
agggtttag
DBGET
integrated database retrieval system
