Panicum virgatum (switchgrass): 120659244
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Entry
120659244 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit epsilon-like
KO
K09497
T-complex protein 1 subunit epsilon
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120659244
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120659244
04147 Exosome [BR:
pvir04147
]
120659244
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120659244
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120659244
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120659244
Exosomal proteins of colorectal cancer cells
120659244
Exosomal proteins of bladder cancer cells
120659244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120659244
NCBI-ProteinID:
XP_039793251
LinkDB
All DBs
Position
2N:complement(1022887..1027634)
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AA seq
535 aa
AA seq
DB search
MALAFDEFGRPFIILREQDKKTRLRGLDAQKANIAAAKAVARILRTSLGPKGMDKMLQSP
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAEKLL
ERGIHPIRVAEGYEMASRIAFEHLERISQKFEFSADNIEPLVQTCMTTLSSKFVNRCKRA
LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGVVVDKDMSHPQMPKRIE
DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLREQEQKYFDEMVQKCKDVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSLEKLGKAGLVREKSF
GTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGS
AEISCSIAVETAADRHPGVEQYAIRSFADALDAVPLALAENSGLPPIDTLTAVKAQQVKE
SNPHCGIDCNDVGTNDMKEQNVFETLIGKQQQMLLATQVVKMILKIDDVISPSEY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgccttcgacgagttcgggcgccccttcatcatcctccgggagcaggataag
aagacgcgcctgcgcggcctcgacgcgcagaaggccaacatcgccgccgccaaggccgtc
gcgcggatcctccgcacctcgctcggacccaagggcatggacaagatgctccagtccccc
gacggcgacgtcaccataacaaatgacggggcaaccatcctggagcagatggatgttgac
aaccagattgcaaagctgatggtggagctgtcccgcagtcaagactatgaaatcggggat
ggtaccactggggttgttgtcatggcgggggctctcctggagcaggctgagaagcttctg
gaacgcggtattcacccaattagggtggctgaaggctatgagatggcgtcaaggatagct
tttgaacacctagagcgcatctcccagaagtttgagttcagtgcagacaatatcgagcca
ctggttcagacctgcatgacaactctatcgtccaagtttgttaaccgttgcaagcgggca
ctagcagagattgctgtgaaagcagtccttgcggttgctgatttggagaggaaggatgtt
aacttggatttaattaaagtagaaggcaaggttggtggtaagctggaggacactgaactc
atatatggagttgttgttgacaaagatatgagccacccgcaaatgccgaagagaattgag
gatgctaagattgccatcctgacgtgcccattcgagcccccgaagccgaagacaaagcat
aaggttgacattgacactgtagagaaattccagacgctgcgcgagcaagagcagaaatac
tttgatgaaatggttcagaagtgcaaggatgttggtgcgaccctggttatttgtcaatgg
ggtttcgatgatgaagccaatcatttgttgatgcacagaaatctgccagctgtcagatgg
gttggtggtgttgaattggagttgattgccattgctacaggaggacggattgttccgaga
ttccaagagttgagtctggaaaagcttggaaaggctggattagtccgagagaagtccttt
ggaactacaaaggaccggatgctttacattgagcagtgtgccaattccagagctgtaact
attttcattcgtggtggaaacaaaatgatgattgaggagaccaagcgcagtcttcatgat
gctctttgtgtggcaaggaatttgatccgcaataactcaattgtgtatggtggcggttca
gcagagatatcttgttcaattgctgttgaaactgctgcagatcggcatcctggagttgag
cagtatgctatcaggtcatttgctgatgcattagatgctgttccactagccttggctgaa
aatagtggtttgccaccaattgataccttaactgcagtgaaagctcagcaagttaaggag
agcaacccccactgcgggatagactgcaacgacgtcggcaccaacgacatgaaggaacag
aacgtgtttgagactctgatcggcaagcagcaacagatgctgctcgccacccaggtggtg
aagatgatactcaagattgatgatgtcatctcaccgtccgagtactga
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