Panicum virgatum (switchgrass): 120659303
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Entry
120659303 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120659303
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120659303
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120659303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SipA
Motif
Other DBs
NCBI-GeneID:
120659303
NCBI-ProteinID:
XP_039793315
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All DBs
Position
2N:complement(3445727..3452994)
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AA seq
981 aa
AA seq
DB search
MDLYSDDSDPDIDEDLREDLDALRRSCILSGANPDATVAQVSSACCLAGPSTPALAAATA
PAAAGTDGLSSDDDEEEDEDLALVRSIRENLHRLSKASPPPPGDAPGGDGDPSFSPRPIC
TWPPSDTDEDEDDLETLRAIQRRFSHYHSSTSTASPKTMKPEASQGVHSEHFADRNDDEF
AAQKQNAKAPNRTGFPKAALLLVDALKKNRACQKLIRRKLINIEAKIEENKDLGDRVKCL
LGYQLSCRKSAGRTLSQKQDPRVRLISSRKPIRLSEKNNNRKMPALFLGPAENPHVSKYK
MVLERFPMSFKKQPWSDVEKDKLARGIKQQYQETLILDSLNNGSAIGDFSAIDMAYALTN
AAGNFEVTPESLRSVLPLINWDKISAMYLPGRSGAECESRWLNCDDPLINREAWTAQEET
KLLLIVQEKGMYNWINIAVTLGTHRTPFQCLVRYQRSLNPHILNKAWTKEEDLQLQAAVE
TFGEKWQLVSASLDGRTGNQCSNRWRKTLHPTRTRVGRWHMDEDKRLMVSVKLFGSGSWS
RIAPFIPGRTQTQCHERWRNILDPNIDLGKWRPEEDSKLLAAVSEFGPCWSKIAMMIPGR
NDNMCSRRWNKLCKHQLPAVKAAIQLKKSVFQTNFVDRTKERPAIAPSDLMALVQAKDDG
SGENTRDRSRQQTKENLAVSNIVNSSTAPVFVAANIVSNTISRRPRRKSTRQKSKKQTEE
NVAVPDGVNDLSSSCSRSRKRKSTTGSNATVQKRMRGSISVDNEAVPIELRGTDSANNEV
GTNTIMDPVSVGAEGVVKKRTRRSKPAGSEGATRKRTCSSSTDNEVGTNMMKDPVSGEVG
VVKKITSRSKPVGNEGAARKKMRASVPVGDEGAIKKTGSDATENHGGVTKRKRAPSRRKS
AGNNLTTEDVANASLELGLPSTPSEERVVDAGNINKGRRKSAPRPKQIDMSEGDADKHSP
STRLASCLSFARMKGIDRNKR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtactccgacgactcggacccggacatcgacgaggatctgcgcgaggacctc
gacgcgctgcgccgctcatgcatcctctccggggccaacccggacgccaccgtcgcgcag
gtctcctccgcctgctgcctcgccgggccctccacccccgccctcgccgcggcgacggcc
ccggcggcggcgggcaccgatggcctctcctcggacgacgacgaggaggaggacgaggac
ctggccctcgtccgcagcatccgcgagaacctccaccgcctcagcaaggcctcgccgccg
ccgccgggcgacgccccagggggggacggcgacccctccttctcgccgcgcccgatctgc
acgtggccgccgtccgacacggacgaggatgaggacgacctcgagacgctccgcgccatc
cagcgccgcttctcgcactaccactccagtacctctaccgcgtcaccaaagaccatgaaa
cctgaggcgtctcagggagtgcacagcgaacattttgcggacaggaacgatgacgagttt
gctgcacagaagcagaatgcaaaggctcctaatcgaactgggttcccaaaagctgcgcta
ttattagtggatgctctaaagaagaacagagcatgccagaagttaattagaagaaaattg
attaacattgaagcgaaaattgaagaaaataaggatcttggggatcgtgtaaaatgtctt
ttgggttatcagttaagctgccgaaaatcagccggcagaactttaagccagaagcaggat
cctcgtgtcagattgatttcttctcggaaaccaattcggctgtctgaaaagaataataac
agaaagatgccggcactatttcttgggccagctgagaacccccatgtttcaaagtataaa
atggtgctggagcgattcccgatgtcatttaagaaacaaccatggtcagatgtggagaaa
gataaacttgccagaggaataaagcagcaatatcaagaaacattgattttggactcgctg
aataatggaagtgccattggtgacttcagtgctattgatatggcatatgcactgacgaat
gctgctggtaattttgaggtgactccagaaagtcttagatcggtacttccactaataaac
tgggataaaatttctgctatgtacctgcctggtcggtctggtgctgaatgcgaatcgagg
tggctaaactgtgatgacccattgattaaccgtgaagcctggactgcccaggaggaaaca
aaacttctactaattgttcaagaaaagggaatgtacaactggattaacatagcagttaca
ttgggcactcaccggactcctttccagtgtcttgttcgttatcaacgaagtcttaatccc
cacatattgaacaaggcttggacaaaagaggaggatcttcaacttcaagctgctgttgag
accttcggtgagaagtggcaacttgtatcagctagcctggatggtcgtactggcaatcag
tgctctaataggtggaggaaaaccttgcaccctacaaggacaagagtgggaagatggcat
atggatgaggacaaacgcctcatggtttctgtcaagctatttggatctggcagctggagt
aggattgctccatttattcctggccgcacacaaacgcaatgccacgagaggtggcgtaat
attcttgatccaaatatagatcttgggaagtggcggcctgaggaagattcaaagttattg
gctgcagtatctgagtttgggccttgctggtccaagattgctatgatgattcctggccgt
aatgataatatgtgctctagacgatggaataaactttgtaaacatcagctgcctgcagtt
aaagcagccattcaactaaagaaatctgttttccaaaccaattttgttgatagaacaaaa
gagcggcctgccattgcccccagtgacctaatggcacttgtgcaagcgaaagatgacgga
tctggcgagaacacaagagatagatccagacagcaaaccaaagaaaacctagctgtgtcc
aacattgtcaacagttcaactgctcctgtttttgttgctgccaatattgtttcaaacaca
atttcaagaagaccaaggaggaaatcaacaagacaaaaatcgaaaaagcaaactgaagag
aatgttgctgtgcctgatggtgtcaacgatttatctagcagctgtagcagatccagaaag
aggaaatctactactggcagcaatgccactgtacaaaagagaatgaggggatctatctct
gtggataatgaggctgttccaattgaattgaggggcactgacagcgctaataatgaggta
ggaacaaatacaataatggaccctgtgtctgttggtgctgagggagtagtcaaaaagaga
accaggcgttcgaaacctgctggcagtgagggggctaccagaaagaggacgtgctctagc
agcactgataatgaggtaggaactaatatgatgaaggaccctgtctctggtgaagtggga
gtagtcaaaaagataacaagtcgctcaaaacctgttggcaatgagggggctgccagaaaa
aagatgagggcctctgtccctgttggtgatgaaggcgccatcaaaaagacaggttctgac
gccactgaaaatcatggtggtgtgacgaaaaggaagagagcaccatcaaggaggaaatca
gctggaaataatttgacgacagaggatgtggcgaatgcttcccttgagttgggccttcct
agtacgccttctgaagaaagagttgttgatgctggaaatataaataaagggagaagaaag
tcagccccaagacctaagcaaatagatatgtctgaaggggatgctgataaacactcccca
tccacacgacttgccagttgcctgtcgtttgcccgtatgaaaggaatcgacaggaacaaa
agataa
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