Panicum virgatum (switchgrass): 120659362
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Entry
120659362 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit A-10-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120659362
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120659362
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
120659362
NCBI-ProteinID:
XP_039793412
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All DBs
Position
2N:complement(4340173..4344619)
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AA seq
256 aa
AA seq
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MRSAAAMCFQEHGLAFQVVADGGRGHGGGATAAPWWATTAQGFAAKFPISFSSGDSDPPQ
DHKYHEPSAAGMAAYPELHKYHGPFDLAFGQSMVWSNNAGAGQRQSYGLYSPYGAQAMHG
RVLLPPAVAAKEPVYVNAKQFKGILRRRLARARAARDLRASRNRKPYLHESRHLHALRRA
RGSGGRFLNTRSLAAGDPAPPGGPEPTEDSASKAATLHPVQDRQDVFHSSLTNMAGDGDG
RWACAAPRGCRDLLKA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgcggcggcaatgtgcttccaggagcacgggctagcattccaggtggtcgcc
gacggcggcaggggccatggcggcggcgcaaccgcggcaccgtggtgggcgactactgct
caggggtttgccgctaagtttccgatcagcttcagctctggcgattctgaccctccgcaa
gaccacaaatatcatgagccttccgcagcaggcatggccgcctacccggagttgcacaag
taccatggccctttcgatctggcatttgggcagtccatggtgtggagcaacaatgccggt
gctggtcagcggcagagctatggtctgtactctccatatggagctcaagctatgcacggc
agggtgctcctgccgccggcggtcgccgccaaggagccggtctacgtgaacgccaagcag
ttcaaaggcatcctccggcggcgcctggcccgcgccagggcggctagggacctcagggcc
tccaggaaccgcaagccgtacctccacgagtcgcggcacctgcacgcgctccgccgcgcg
cggggctctggcggccgcttcctcaacaccaggagcctcgccgccggcgacccggcgccc
ccgggaggacctgagcctactgaggacagcgcgtcgaaggcggcaacgctgcacccggtg
caggaccgccaggacgtcttccactcgtcgttgacgaacatggccggcgacggcgatggg
aggtgggcctgcgcggcgccacggggctgccgcgacctgctcaaggcgtga
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