KEGG   Panicum virgatum (switchgrass): 120659405
Entry
120659405         CDS       T07260                                 
Name
(RefSeq) syntaxin-132-like
  KO
K08486  syntaxin 1B/2/3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120659405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120659405
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120659405
Membrane trafficking [BR:pvir04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    120659405
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   120659405
  Exosomal proteins of other body fluids (saliva and urine)
   120659405
SSDB
Motif
Pfam: Syntaxin SNARE Vac_Fusion COG2p_C Rv1476 Fusion_gly FapA DUF6548 Stonustoxin_helical cas_Cpf1_2nd
Other DBs
NCBI-GeneID: 120659405
NCBI-ProteinID: XP_039793470
LinkDB
Position
2N:complement(4837177..4841339)
AA seq 304 aa
MNNLLSDSFELPRRDSSRDADIEMGLHQADASDNLKDFLKKVDAIESLIAKLTNLLNKLQ
TANEESKAVTKASAMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLSNRQKPGCGKGS
AVDRSREQTTGAIKKKLKERMDDFQALREAIRQEYREVVERRVFTVTGNRPDEETIDDLI
ETGKSEQIFKDAIQQQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQG
DMINNIETHVSNATNHIQQGVSALQNAKRLQKNSRKWMCYAIIILLVIVVIIVVAVIQPW
KKGT
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaacaacctcctttcggattcctttgagctccctcggcgggactcttcaagagatgca
gacattgaaatgggattgcatcaggctgatgcttcagacaacttaaaggatttcttgaaa
aaggttgatgcaattgagagcctaattgcaaagctgacaaatctattgaataagcttcag
actgcaaacgaggaatccaaagcagttacaaaagcaagtgccatgaaagcgatcaagcag
cggatggagaaagatattgatgaagtggggaaaattgctcgtcaggcgaagacaaaagtt
gatgaactcgaaaaagataacttatcaaataggcaaaaacctggatgtggaaaggggtct
gctgtggaccggtcaagagaacagactactggagcaattaaaaagaaattgaaggagcgg
atggatgattttcaggctttaagagaagcaatcaggcaagaataccgtgaggttgttgaa
agaagggtttttactgtaactggtaatcgtcctgatgaagagacaatcgatgacttgata
gagactggaaaaagtgagcaaatcttcaaagacgcaatccaacagcagggaagaggccag
atactggacaccgttgctgaaatacaggagcgacatgatgctgtaagggatctagagagg
aagctacttgagttgcaacagatattcatggacatggcagttcttgttgaggctcaagga
gacatgatcaacaacatcgagacacatgtttcgaatgctaccaatcacatacagcaaggc
gttagcgctctacagaatgccaagagattgcagaagaattcgagaaagtggatgtgctat
gccatcatcatactgctggtgatagtggtgatcattgttgtggcagtcatccagccgtgg
aagaagggcacttaa

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