KEGG   Panicum virgatum (switchgrass): 120659413
Entry
120659413         CDS       T07260                                 
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit I-like
  KO
K03246  translation initiation factor 3 subunit I
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:pvir03012]
    120659413
Translation factors [BR:pvir03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    120659413
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 120659413
NCBI-ProteinID: XP_039793477
LinkDB
Position
2N:complement(4899540..4904088)
AA seq 326 aa
MRPILMKGHERPLTFLRYNRDGDLLFSCAKDHTPTVWYADNGDRLGTYRGHNGAVWSCDV
SRDSARLITGSADQTAKLWEVSTGRELFSFRFDAPARSVEFAIGDALAVITTDNFMDHVP
TVQIKHIAEDLDDQTDESALVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDSETGKL
LKESDKESGHQKMITSLSKSSDWSHFITGSLDKSAKLWDARTLTLIKTYVTERPVNAVDI
SPTHDTVVLGGGQDAMNVTMTDRRAGKFEAKFYHKILQEEIGGVKGHFGPINALAFNPDG
RSFSSGGEDGYVRLHHFDSDYFNIKM
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctgcgctacaaccgc
gacggcgacctcctcttctcctgcgccaaggaccacacccccacggtctggtacgccgac
aacggcgaccgcctcgggacctaccgcggccacaacggcgccgtctggtcctgcgacgtc
tcccgcgactcggcgcgcctcatcacgggctccgccgaccagaccgccaagctctgggag
gtcagcacggggcgggagctcttcagcttccgcttcgacgcgcccgccaggtccgtcgag
ttcgccatcggggacgcgctagcggtcatcaccaccgacaacttcatggaccacgtcccc
accgtccagatcaagcacatcgccgaggacctcgacgaccagacggatgaatccgcgctt
gtgatcactggcatcaaggggaggatcaacagggcggtttggggcccgctcaacaggaca
atcatcactgctggcgaggatgctaccattcgcatctgggactccgagaccggtaaactg
ctgaaagagtcagataaggaatctggacatcagaagatgattacgtcactgtcaaaatcc
tcagattggtctcatttcattacaggttccttagataaatctgctaagctatgggatgca
agaacgctaaccctgatcaagacatatgtcacagagcgacctgttaatgctgttgacatc
tctccaactcatgatactgtggttcttggaggtgggcaagatgcaatgaatgtgactatg
acagaccgccgtgctggtaaatttgaggctaaattctatcacaagattttgcaagaggaa
attggtggtgtcaaaggacattttggaccaattaatgctttggcatttaaccctgacgga
cggagcttttcgagtggtggtgaagatggatatgtaaggctgcaccattttgattccgac
tacttcaacatcaagatgtag

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