Panicum virgatum (switchgrass): 120659631
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Entry
120659631 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120659631
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120659631
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GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
120659631
NCBI-ProteinID:
XP_039793765
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Position
2N:complement(7723722..7727993)
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AA seq
654 aa
AA seq
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MPAPAPRKKRLVRAGLLAAAAGYLAFVLLFELPLLPFSGSSALPIPHPRRRELEAAAAAA
FASPSSPARPAKPAFPAGAPAPAAGGARPLPVFSSLLLLPRPNGTATPFDAAAADAFAAA
RPHLAHLQAAPAPASSAPASTSPAPPPACPASVSVHREQLPYDGVRVVELPCGLAVGSHV
TVVARPRPARLEYDPKIAERRDGEAAVMVSQFMVELVGTKAVDGEAPPRILHFNPRIRGD
YSRRPVIEMNSCYRMQWGQSQRCEGFASRPAEDTVDGQLKCEKWIRDDDNKTEESKMKWW
VKRLIGRPKDVHISWPYPFTEGKLFVMTLTAGLEGYHVNVDGRHVASFPYRTGYSLEDAT
ALSLNGDIDIESVFASSLPNSHPSFAPERYLEMSEQWRAPPLPTEPVELFIGILSAASHF
AERMAVRKSWMMYTRKSSNIVARFFVALNGKKEVNVELKKEAEFFHDIVIVPFIDSYDLV
VLKTVAIAEYGVRVVPAKYVMKCDDDTFVRIDSVLDQVKKVQSDKSVYVGSINYFRRPLR
SGKWAVTYEEWPEEVYPNYANGPGYVISSDIARYIVSEFDNQTLWLFKMEDVSMGMWVEK
FNNTRRPVEIRHDVRFYQSGCYDGYFTAHYQSPQHMICLWRKLQSGSAQCCNVR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaccggcgccgcggaagaagcggctggtccgcgcgggcctcctcgccgccgcc
gcgggctacctcgcgttcgtcctcctcttcgagctccccctgttgcccttctcgggctcg
tccgcgctccccatcccgcacccgcgccgccgggagctggaggccgcagcggcagcggcg
ttcgcgtccccgtcctcccccgcccgccccgccaagccggcgttccccgccggcgcgccg
gccccggccgcgggcggcgcgcgcccgctcccggtcttctcctccctcctcctcctcccg
cggcccaacggcacggccacccccttcgacgccgccgccgccgacgccttcgccgccgcc
aggccgcacctcgcgcacctgcaggccgccccggcccccgcctcctccgcgcccgcgtcc
acgtcgccggcgccgccgccggcctgcccggcctccgtctccgtgcaccgggagcagctc
ccctacgacggcgtccgcgtggtggagctcccctgcggcctcgcggtgggctcgcacgtc
accgtcgtggcccgccccaggcccgcgcggctcgagtacgaccccaagatcgccgagcgc
agggacggggaggccgccgtcatggtctcgcagttcatggtcgagctcgtcggcaccaag
gccgtcgacggggaggcgccgcccaggatcctgcacttcaaccccaggatccgtggggac
tacagccggaggcccgtcatcgagatgaacagctgctaccggatgcagtggggccagtcg
cagcgctgcgagggcttcgcctcccgacccgccgaggacaccgttgatgggcaactcaag
tgtgagaaatggattcgtgacgatgacaacaagacagaggagtcaaagatgaaatggtgg
gtgaaacgtttgattggcagaccaaaggatgtccacatcagttggccatacccattcaca
gaaggcaagctatttgttatgactctaacagctggtttggaaggttaccatgtcaacgtc
gatgggcgacatgttgcttcatttccttaccgcaccggttactcccttgaggatgcaacc
gcattgtccctcaatggagatattgatattgagtcagtttttgctagttctctacccaat
tcgcaccctagttttgcaccagagagataccttgagatgtctgagcagtggagggcccca
ccactgccaactgaacctgttgagctcttcattggtattctttcagcagccagccatttt
gctgagcgtatggctgtaaggaagtcatggatgatgtatacaaggaaatcatccaatatt
gtagctcggttctttgtggctctgaatggaaagaaggaggtcaatgtagagctgaagaag
gaggcggagttcttccatgatatcgttatagtgcctttcattgatagctatgaccttgtt
gtgttgaagactgttgcgattgccgagtatggggtgcgtgttgtccctgcaaagtatgta
atgaaatgtgatgatgatacatttgtcagaattgattctgttctggatcaagtaaagaaa
gttcaaagtgataagagtgtgtatgtgggtagtatcaactactttcgtcgaccactaaga
tctggcaaatgggccgtaacatacgaggaatggccggaagaagtatatccaaattacgct
aatggacctggctatgtaatttcttcagatattgcgcgctacattgtatctgaatttgac
aatcagacgctttggctgtttaaaatggaggatgtgagcatgggcatgtgggtggagaag
ttcaacaacacacggcggccggtggagatcaggcatgacgtcaggttctaccagtcaggc
tgctacgatggctatttcacggcgcactaccagtccccacaacacatgatctgcctgtgg
cgaaaactgcagtctgggagcgcccagtgctgcaacgtgagatga
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