Panicum virgatum (switchgrass): 120659649
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Entry
120659649 CDS
T07260
Name
(RefSeq) coatomer subunit gamma-2
KO
K17267
coatomer subunit gamma
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120659649
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120659649
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120659649
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120659649
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
Cnd1
HEAT_2
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
120659649
NCBI-ProteinID:
XP_039793786
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Position
2N:8317765..8325440
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AA seq
888 aa
AA seq
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MAQPLVVKKDDDLDEEEYYSPFLGIEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQ
GDTFTKVEATEVFFATTKLFQSKDAGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKT
DMYRANAIRVLCRIIDSTLLTQIERYLKQAIVDKNPVVASAALVSGIYLLQTSPEVVKRW
SNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTS
QVIRESGVNQGGDRPFFDFLESCLRNKAEMVILEAARAITELNGVTSRELTPAITVLQLF
LSSSKPVLRFAAVRTLNKVASTHPLAVTNCNIDMESLISDQNRSIATLAITTLLKTGNES
SVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKK
AIVDSIIILIRDIPDAKESGLFHLCEFIEDCEFTYLSTQILHFLGNEGPKTSDPSKYIRY
IYNRVILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDEVRDRATLYLKML
GGEATVGETEKDVNEFLFGSLDVPLVNLETSLRNYEPSDAPFDISSVPKETKSQPIAEKK
STGKKPTGPASAVSGPVATVDASYEKLLSSIPEFADFGKLFKSSAPVELTEAETEYSVNV
VKHIYDGHVVLQYNCTNTIPEQLLEQVVVFVDASEADEFLEVSSKPLESLPYDSPGQTFV
AFEKPDGVIATGKFSNILKFIVKEVDPSTGEAEDDGVEDEYQLEDLEIVSADYMLKVGVS
NFRNAWENMDPESERVDEYGLGVREGLAEAVSAVIGILGMQPCEGTDAVPSNSRSHTCLL
SGIFIGNVKVLVRLSFGITSSKEVAMKLAVRSDDPEISDKIHEIVANG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccgctcgtcgtgaagaaggacgacgacctcgacgaggaagagtactactcg
ccgttcctcggcatcgagaagggcgccgtgctgcaggaggctcgcgtcttccacgacccg
cagctcgacgcgcggcgatgctgccaggttatcaccaagcttctatacctgctcaaccag
ggtgacacctttaccaaggtggaggccacagaagtcttctttgcaacgaccaagctgttc
caatccaaggatgcagggcttaggaggatggtatacctcatgatcaaggaactgtcgcct
tcagctgatgaggttatcattgtcaccagctctttgatgaaggacatgaatagcaaaact
gatatgtaccgtgcaaacgctattcgagttctttgtcgtattatcgactcaactcttctc
acccaaattgagaggtatttgaagcaagccattgttgataagaatcctgttgttgccagt
gcggcccttgttagtggcatctacttgcttcagacaagtccggaagttgtgaaaagatgg
agcaatgaagttcaggaggctgtgcagtcaagagctgctcttgtgcagtttcatgccctt
gctcttctgcaccaaattaggcaaaatgaccgattggctgtcagtaagcttgttactagt
ttgaccaggggttcagttcgctcgcctttggcccagtgcctgcttattcggtacactagc
caggtgattagagagtctggagtaaaccaaggtggagatcgtcctttctttgatttcctt
gagtcctgtctcaggaacaaagcagagatggtcatacttgaggctgcaagagcaataact
gaactgaatggtgtcacaagccgtgagctcacacctgcaataactgtcctgcagttattc
ttaagttcatctaaacctgttctcagattcgcagctgttcgcacacttaataaggttgca
tcaactcatcctttggctgtcacaaattgtaacatagacatggaaagcttaatctctgat
cagaacagaagcattgcaacccttgcgattacaacactgttgaagactggcaacgagtca
agtgttgatcgtttaatgaaacagatgaccaactttatgtcagacatagctgatgaattc
aagatcgttgttgtcgaagcaataagatccctatgcttgaaattccctctgaaatatcgc
tcactcatgaacttcttgagtaatattctacgagaagagggtggattcgagtacaagaaa
gccatagttgattcaatcatcatactcattagagatattcctgatgcaaaagaaagtggt
ttatttcacttatgtgaattcatagaagactgtgaattcacctatttatccacccagata
cttcactttttgggaaatgaaggcccaaaaacatcagatcccagtaaatacatacgatat
atatacaatagggtgatacttgaaaatgctacagttcgagctagtgcagtaagtacattg
gcaaagtttggcgcattggttgactcactcaagcctcgcatatttgttctgctgagacgt
tgcctgtttgatggtgatgatgaggtgcgtgacagagcaaccctttacctcaaaatgtta
ggtggggaagctacagttggtgagactgagaaggatgtgaacgagtttctctttggttca
cttgatgttccactagtaaacttggagacaagcctgcggaattatgaaccttcggatgca
ccatttgatatttcgtctgttccaaaggagacaaaatcacaaccaattgctgagaaaaag
tctacaggcaagaaaccaactggtccagcatctgctgtcagtggccctgttgcaactgtt
gatgcatcatatgagaagcttctttcatccattcctgaattcgctgattttggaaagcta
tttaagtcatcagcacctgtagaattgactgaagctgagactgaatattcagttaatgtt
gtgaagcatatttatgatgggcatgttgtgctccaatacaactgtaccaatacaattcct
gaacagttgcttgaacaggtggttgtttttgttgatgcttcagaggctgatgaattttta
gaagtttcctcgaagcctttagaatcattaccttatgattcccctgggcagacctttgtg
gcttttgagaagccagacggtgtcattgccactggcaagttctccaatatactgaaattc
attgttaaggaggttgatccatccacaggtgaagccgaggatgatggtgttgaagatgag
taccagcttgaagatcttgaaatcgtttctgctgattatatgttgaaggtgggagtatcc
aacttccgaaatgcctgggaaaacatggatccagagagcgagcgggtcgatgagtatgga
cttggagtaagggagggcttggctgaggctgtaagtgctgttataggcatccttggcatg
cagccttgtgagggtactgacgctgtcccaagcaattcaaggtcacacacttgtctgctc
tcgggcatatttattggtaacgtaaaagtcttggtgaggctgtcatttggaatcacttct
tcgaaggaggtggccatgaagctagcagtcagatcagatgatccagagatcagtgacaag
atccacgagattgttgctaatggctaa
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