Panicum virgatum (switchgrass): 120659650
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Entry
120659650 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120659650
KO
K17408
small subunit ribosomal protein S29
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120659650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120659650
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120659650
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
120659650
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
120659650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP3
nSTAND_NTPase5
ATP-gua_PtransN
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120659650
NCBI-ProteinID:
XP_039793787
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Position
2N:complement(8336367..8341597)
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AA seq
468 aa
AA seq
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MLLRPLLRRAAAAASSGGTRATALPDPPAALASLLLASRSYAKAKGGGKPASSTSNRGKV
RAKDPRGGASADDADGDEFAGGGGGDDLDAEFELPTDPLPPTYDPALDVGPGGRPLFAFT
DTFGSFAHRNANVYVDFTLDQWNAMLPEGLPAGMMKEFQETRRCAVMVRKSFLDLRDNFR
RIVDPAVTTNLKDIKKQIVLDGPRSCGKSIALAMLVHWARTEGWLVFYVPQGKDWTHGGF
FYRNTYSDLFDTPIQAAKILQDFLKYNETRLLQLPCQIFEPIPLGEGAGVGKMKGADTVE
MPEGSTLYDLIQTGITHTHASVGVVVRLRKELSLVKDVPVLFAIDQYNSWFTFSEFQEPV
TVRSCRPIHAKELTMVNAYRSMLHNDMMVGAFSHSTAVGKLRQELPDVPSDARLMFPRYT
LEEAETVCYYYMRQKIIRRESFSEEKWKKIYYLSNGNGSEMRWLAAFV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccgccccctcctccgccgcgccgccgccgcggcatcctccggcggcactcgc
gccaccgcgctccccgacccgcccgctgcgctcgcctccctcctcctggcctcccggtcc
tacgcgaaggccaagggcgggggcaagccggcgtcgtccacgtccaaccgcggcaaggtc
cgcgctaaggacccgcggggcggggcgtcggcagacgacgccgatggggatgagttcgcc
ggcggcggcgggggcgacgacctcgacgccgagttcgagctgcccacggacccgctgccc
ccaacctacgacccggcgctcgacgtcggcccaggtggccggccgctcttcgccttcacc
gacacgttcgggtcgttcgcgcaccgcaacgccaacgtctatgtcgacttcactttggat
caatggaatgccatgttaccagaagggttgccagcagggatgatgaaggagtttcaagag
acaagacggtgtgctgtaatggtgaggaagagcttcctagatctcagggataacttccgt
aggattgttgatccggccgttacaaccaatctcaaagatatcaaaaaacaaattgtcttg
gatggcccacggagttgcggtaaaagcattgcacttgcgatgcttgtccactgggcacgt
actgaaggatggctggtattctatgttccacaagggaaggattggactcatggaggattc
ttctatagaaacacatacagtgatttgtttgatacaccaatacaagctgccaagatcttg
caggatttcttgaagtacaacgaaacacgattactgcaattaccatgtcaaattttcgag
cctatccccctgggagaaggtgctggtgttggaaagatgaaaggggctgacacagtggaa
atgcctgaagggtccacattgtatgatctcatccagactgggataacccacacgcatgct
tctgttggtgttgtagttcgcttaaggaaggaactatcccttgttaaagatgtgcctgta
ttgtttgcaattgatcagtacaatagttggtttacattcagtgagtttcaggagcccgta
actgttagatcttgtcgaccaatccatgcgaaagagcttacaatggtcaatgcttatagg
tcaatgttacacaatgatatgatggtaggagccttttcacactcaacggctgttggcaaa
ctacggcaggagcttccagatgttccttctgacgctcgtttgatgtttccacgttacacc
ttagaagaagctgagactgtgtgttactattatatgaggcaaaagatcattcggcgtgag
agtttttcagaagagaagtggaaaaagatctattatttatcaaatggaaacggctcagag
atgagatggcttgctgcctttgtttga
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